Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcc1P97496 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcc1P97496 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcc1P97496 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcc1P97496 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcc1P97496 Gm23596-201ENSMUST00000104304 132 ntBASIC15.69■□□□□ 0.1
Smarcc1P97496 Gm16397-201ENSMUST00000122201 494 ntBASIC15.69■□□□□ 0.1
Smarcc1P97496 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcc1P97496 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC15.69■□□□□ 0.1
Smarcc1P97496 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
Smarcc1P97496 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcc1P97496 Gm5733-201ENSMUST00000190232 939 ntBASIC15.69■□□□□ 0.1
Smarcc1P97496 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcc1P97496 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Smarcc1P97496 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcc1P97496 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcc1P97496 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcc1P97496 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC15.69■□□□□ 0.1
Smarcc1P97496 Gm5847-201ENSMUST00000178959 1595 ntBASIC15.69■□□□□ 0.1
Smarcc1P97496 Gm38355-201ENSMUST00000192514 1570 ntBASIC15.69■□□□□ 0.1
Smarcc1P97496 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcc1P97496 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcc1P97496 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcc1P97496 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcc1P97496 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Smarcc1P97496 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smarcc1P97496 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smarcc1P97496 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smarcc1P97496 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smarcc1P97496 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC15.68■□□□□ 0.1
Smarcc1P97496 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smarcc1P97496 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Smarcc1P97496 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smarcc1P97496 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smarcc1P97496 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smarcc1P97496 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC15.68■□□□□ 0.1
Smarcc1P97496 Selenot-ps-201ENSMUST00000119098 593 ntBASIC15.68■□□□□ 0.1
Smarcc1P97496 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC15.68■□□□□ 0.1
Smarcc1P97496 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC15.68■□□□□ 0.1
Smarcc1P97496 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC15.68■□□□□ 0.1
Smarcc1P97496 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC15.68■□□□□ 0.1
Smarcc1P97496 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Smarcc1P97496 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Smarcc1P97496 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smarcc1P97496 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Smarcc1P97496 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smarcc1P97496 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smarcc1P97496 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smarcc1P97496 Gm28386-201ENSMUST00000189147 1849 ntBASIC15.68■□□□□ 0.1
Smarcc1P97496 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smarcc1P97496 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Smarcc1P97496 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smarcc1P97496 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Smarcc1P97496 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smarcc1P97496 Ntrk2-208ENSMUST00000225583 2719 ntBASIC15.67■□□□□ 0.1
Smarcc1P97496 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcc1P97496 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC15.67■□□□□ 0.1
Smarcc1P97496 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcc1P97496 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcc1P97496 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcc1P97496 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcc1P97496 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcc1P97496 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC15.67■□□□□ 0.1
Smarcc1P97496 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcc1P97496 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcc1P97496 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC15.67■□□□□ 0.1
Smarcc1P97496 Gm24934-201ENSMUST00000103764 111 ntBASIC15.67■□□□□ 0.1
Smarcc1P97496 Gm13394-201ENSMUST00000121658 1000 ntBASIC15.67■□□□□ 0.1
Smarcc1P97496 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC15.67■□□□□ 0.1
Smarcc1P97496 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcc1P97496 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC15.67■□□□□ 0.1
Smarcc1P97496 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcc1P97496 Mir6958-201ENSMUST00000184207 73 ntBASIC15.67■□□□□ 0.1
Smarcc1P97496 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC15.67■□□□□ 0.1
Smarcc1P97496 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC15.67■□□□□ 0.1
Smarcc1P97496 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcc1P97496 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC15.67■□□□□ 0.1
Smarcc1P97496 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC15.67■□□□□ 0.1
Smarcc1P97496 CT030637.1-201ENSMUST00000228016 669 ntBASIC15.67■□□□□ 0.1
Smarcc1P97496 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcc1P97496 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Smarcc1P97496 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcc1P97496 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC15.67■□□□□ 0.1
Smarcc1P97496 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcc1P97496 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Smarcc1P97496 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcc1P97496 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcc1P97496 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcc1P97496 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcc1P97496 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcc1P97496 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcc1P97496 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcc1P97496 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcc1P97496 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcc1P97496 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC15.66■□□□□ 0.1
Smarcc1P97496 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcc1P97496 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcc1P97496 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcc1P97496 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcc1P97496 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms