Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lig3P97386 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lig3P97386 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lig3P97386 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lig3P97386 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lig3P97386 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lig3P97386 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Lig3P97386 Gm22042-201ENSMUST00000082989 165 ntBASIC13.77□□□□□ -0.21
Lig3P97386 Gm26232-201ENSMUST00000083360 166 ntBASIC13.77□□□□□ -0.21
Lig3P97386 Gm24136-201ENSMUST00000083374 165 ntBASIC13.77□□□□□ -0.21
Lig3P97386 Rnu1b6-201ENSMUST00000083839 166 ntBASIC13.77□□□□□ -0.21
Lig3P97386 Gm26110-201ENSMUST00000083971 165 ntBASIC13.77□□□□□ -0.21
Lig3P97386 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lig3P97386 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lig3P97386 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lig3P97386 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Lig3P97386 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lig3P97386 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lig3P97386 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Lig3P97386 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lig3P97386 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lig3P97386 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Lig3P97386 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
Lig3P97386 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lig3P97386 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lig3P97386 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lig3P97386 Gm37269-201ENSMUST00000193906 1891 ntBASIC13.76□□□□□ -0.21
Lig3P97386 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Lig3P97386 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
Lig3P97386 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lig3P97386 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lig3P97386 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Lig3P97386 Gm5939-201ENSMUST00000119613 2874 ntBASIC13.76□□□□□ -0.21
Lig3P97386 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lig3P97386 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Lig3P97386 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Lig3P97386 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lig3P97386 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lig3P97386 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lig3P97386 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lig3P97386 Gm2231-201ENSMUST00000125661 612 ntBASIC13.76□□□□□ -0.21
Lig3P97386 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC13.76□□□□□ -0.21
Lig3P97386 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Lig3P97386 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC13.76□□□□□ -0.21
Lig3P97386 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC13.76□□□□□ -0.21
Lig3P97386 Gm34767-201ENSMUST00000191813 1062 ntBASIC13.76□□□□□ -0.21
Lig3P97386 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
Lig3P97386 Gm18212-201ENSMUST00000211678 889 ntBASIC13.76□□□□□ -0.21
Lig3P97386 AC134254.1-201ENSMUST00000221362 167 ntBASIC13.76□□□□□ -0.21
Lig3P97386 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Lig3P97386 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
Lig3P97386 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lig3P97386 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lig3P97386 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lig3P97386 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lig3P97386 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lig3P97386 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lig3P97386 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lig3P97386 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13.76□□□□□ -0.21
Lig3P97386 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lig3P97386 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lig3P97386 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Lig3P97386 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lig3P97386 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Lig3P97386 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lig3P97386 Gm44086-201ENSMUST00000203251 2349 ntBASIC13.75□□□□□ -0.21
Lig3P97386 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lig3P97386 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lig3P97386 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Lig3P97386 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lig3P97386 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Lig3P97386 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC13.75□□□□□ -0.21
Lig3P97386 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Lig3P97386 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lig3P97386 Gm12566-201ENSMUST00000121479 359 ntBASIC13.75□□□□□ -0.21
Lig3P97386 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Lig3P97386 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Lig3P97386 Gm3890-201ENSMUST00000182416 207 ntBASIC13.75□□□□□ -0.21
Lig3P97386 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
Lig3P97386 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC13.75□□□□□ -0.21
Lig3P97386 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC13.75□□□□□ -0.21
Lig3P97386 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lig3P97386 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC13.75□□□□□ -0.21
Lig3P97386 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Lig3P97386 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lig3P97386 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lig3P97386 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Lig3P97386 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Lig3P97386 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.75□□□□□ -0.21
Lig3P97386 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lig3P97386 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lig3P97386 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lig3P97386 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Lig3P97386 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lig3P97386 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
Lig3P97386 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lig3P97386 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lig3P97386 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lig3P97386 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lig3P97386 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms