Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Kcne3-206ENSMUST00000207995 439 ntAPPRIS P1 TSL 2 BASIC8.27□□□□□ -1.09
PrkdcP97313 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
PrkdcP97313 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
PrkdcP97313 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
PrkdcP97313 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
PrkdcP97313 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
PrkdcP97313 AC022682.1-201ENSMUST00000224624 2023 ntBASIC8.27□□□□□ -1.09
PrkdcP97313 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC8.27□□□□□ -1.09
PrkdcP97313 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
PrkdcP97313 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
PrkdcP97313 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
PrkdcP97313 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
PrkdcP97313 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
PrkdcP97313 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
PrkdcP97313 Gm13039-201ENSMUST00000118638 794 ntBASIC8.27□□□□□ -1.09
PrkdcP97313 Gm15746-201ENSMUST00000120684 1027 ntBASIC8.27□□□□□ -1.09
PrkdcP97313 Gm12668-201ENSMUST00000134966 575 ntTSL 3 BASIC8.27□□□□□ -1.09
PrkdcP97313 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC8.27□□□□□ -1.09
PrkdcP97313 Mir7035-201ENSMUST00000184713 82 ntBASIC8.27□□□□□ -1.09
PrkdcP97313 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC8.27□□□□□ -1.09
PrkdcP97313 Krtap3-3-201ENSMUST00000092700 736 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
PrkdcP97313 n-R5s71-201ENSMUST00000093668 119 ntBASIC8.27□□□□□ -1.09
PrkdcP97313 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
PrkdcP97313 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
PrkdcP97313 Hmox1-201ENSMUST00000005548 1569 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
PrkdcP97313 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
PrkdcP97313 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC8.26□□□□□ -1.09
PrkdcP97313 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC8.26□□□□□ -1.09
PrkdcP97313 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC8.26□□□□□ -1.09
PrkdcP97313 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
PrkdcP97313 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC8.26□□□□□ -1.09
PrkdcP97313 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
PrkdcP97313 Gm15886-201ENSMUST00000123155 1250 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
PrkdcP97313 Gm16048-201ENSMUST00000134250 663 ntTSL 3 BASIC8.26□□□□□ -1.09
PrkdcP97313 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC8.26□□□□□ -1.09
PrkdcP97313 Gm26313-201ENSMUST00000157770 308 ntBASIC8.26□□□□□ -1.09
PrkdcP97313 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
PrkdcP97313 Ly6i-202ENSMUST00000166694 620 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
PrkdcP97313 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
PrkdcP97313 Gm26976-201ENSMUST00000182929 908 ntBASIC8.26□□□□□ -1.09
PrkdcP97313 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
PrkdcP97313 2010109A12Rik-201ENSMUST00000031330 549 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
PrkdcP97313 Trim34b-202ENSMUST00000180136 1535 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
PrkdcP97313 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
PrkdcP97313 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
PrkdcP97313 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
PrkdcP97313 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
PrkdcP97313 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
PrkdcP97313 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
PrkdcP97313 Gm14006-201ENSMUST00000122132 981 ntBASIC8.26□□□□□ -1.09
PrkdcP97313 Gm25830-201ENSMUST00000158923 132 ntBASIC8.26□□□□□ -1.09
PrkdcP97313 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
PrkdcP97313 Mt4-201ENSMUST00000034207 398 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
PrkdcP97313 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
PrkdcP97313 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
PrkdcP97313 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
PrkdcP97313 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC8.26□□□□□ -1.09
PrkdcP97313 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC8.26□□□□□ -1.09
PrkdcP97313 Gm20831-201ENSMUST00000177639 1337 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
PrkdcP97313 Ssty1-202ENSMUST00000186035 1341 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
PrkdcP97313 Gm20737-202ENSMUST00000187245 1338 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
PrkdcP97313 Gm20777-202ENSMUST00000187434 1341 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
PrkdcP97313 Gm20873-202ENSMUST00000187857 1342 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
PrkdcP97313 Gm20772-201ENSMUST00000188928 1343 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
PrkdcP97313 Gm21310-202ENSMUST00000189630 1343 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
PrkdcP97313 Gm20795-202ENSMUST00000190909 1344 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
PrkdcP97313 Gm21454-202ENSMUST00000192204 1343 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
PrkdcP97313 Gm21440-201ENSMUST00000192749 1344 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
PrkdcP97313 Gm20831-202ENSMUST00000194411 1344 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
PrkdcP97313 Gm20807-201ENSMUST00000194687 1336 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
PrkdcP97313 Gm21425-202ENSMUST00000195626 1345 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
PrkdcP97313 AC173482.6-201ENSMUST00000225889 1741 ntBASIC8.26□□□□□ -1.09
PrkdcP97313 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC8.26□□□□□ -1.09
PrkdcP97313 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
PrkdcP97313 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC8.26□□□□□ -1.09
PrkdcP97313 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
PrkdcP97313 Mir1941-201ENSMUST00000157834 83 ntBASIC8.26□□□□□ -1.09
PrkdcP97313 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC8.26□□□□□ -1.09
PrkdcP97313 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC8.26□□□□□ -1.09
PrkdcP97313 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
PrkdcP97313 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
PrkdcP97313 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC8.26□□□□□ -1.09
PrkdcP97313 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
PrkdcP97313 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
PrkdcP97313 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC8.25□□□□□ -1.09
PrkdcP97313 Gm6755-201ENSMUST00000100598 864 ntBASIC8.25□□□□□ -1.09
PrkdcP97313 Gm6740-201ENSMUST00000100617 864 ntBASIC8.25□□□□□ -1.09
PrkdcP97313 Gm12389-201ENSMUST00000117696 418 ntBASIC8.25□□□□□ -1.09
PrkdcP97313 Gm16069-201ENSMUST00000131146 545 ntTSL 3 BASIC8.25□□□□□ -1.09
PrkdcP97313 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC8.25□□□□□ -1.09
PrkdcP97313 Itgb1bp1-202ENSMUST00000172834 801 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
PrkdcP97313 Gm17709-201ENSMUST00000174536 1096 ntBASIC8.25□□□□□ -1.09
PrkdcP97313 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC8.25□□□□□ -1.09
PrkdcP97313 Gm43777-201ENSMUST00000197269 376 ntTSL 3 BASIC8.25□□□□□ -1.09
PrkdcP97313 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
PrkdcP97313 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC8.25□□□□□ -1.09
PrkdcP97313 AC162932.1-201ENSMUST00000219209 872 ntBASIC8.25□□□□□ -1.09
PrkdcP97313 AC159282.1-204ENSMUST00000219472 780 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
PrkdcP97313 Gm32872-201ENSMUST00000220037 205 ntTSL 3 BASIC8.25□□□□□ -1.09
PrkdcP97313 Tbc1d21-201ENSMUST00000040217 1283 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms