Protein–RNA interactions for Protein: P70662

Ldb1, LIM domain-binding protein 1, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1P70662 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.49□□□□□ -0.41
Ldb1P70662 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ldb1P70662 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ldb1P70662 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Ldb1P70662 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Ldb1P70662 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ldb1P70662 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ldb1P70662 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ldb1P70662 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ldb1P70662 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ldb1P70662 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Ldb1P70662 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ldb1P70662 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ldb1P70662 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Ldb1P70662 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ldb1P70662 Gm12846-201ENSMUST00000120431 1373 ntBASIC12.49□□□□□ -0.41
Ldb1P70662 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ldb1P70662 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ldb1P70662 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ldb1P70662 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC12.49□□□□□ -0.41
Ldb1P70662 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ldb1P70662 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ldb1P70662 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.49□□□□□ -0.41
Ldb1P70662 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ldb1P70662 Gm3890-201ENSMUST00000182416 207 ntBASIC12.49□□□□□ -0.41
Ldb1P70662 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12.49□□□□□ -0.41
Ldb1P70662 Gm18584-201ENSMUST00000203098 964 ntBASIC12.49□□□□□ -0.41
Ldb1P70662 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC12.49□□□□□ -0.41
Ldb1P70662 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC12.49□□□□□ -0.41
Ldb1P70662 AC126253.1-201ENSMUST00000227974 824 ntBASIC12.49□□□□□ -0.41
Ldb1P70662 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ldb1P70662 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ldb1P70662 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ldb1P70662 Snora73a-201ENSMUST00000082453 205 ntBASIC12.49□□□□□ -0.41
Ldb1P70662 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ldb1P70662 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ldb1P70662 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ldb1P70662 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ldb1P70662 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ldb1P70662 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ldb1P70662 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ldb1P70662 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ldb1P70662 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ldb1P70662 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ldb1P70662 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ldb1P70662 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ldb1P70662 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Ldb1P70662 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ldb1P70662 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Ldb1P70662 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ldb1P70662 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ldb1P70662 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ldb1P70662 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.48□□□□□ -0.41
Ldb1P70662 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Ldb1P70662 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ldb1P70662 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ldb1P70662 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ldb1P70662 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.48□□□□□ -0.41
Ldb1P70662 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.48□□□□□ -0.41
Ldb1P70662 Gm15703-201ENSMUST00000120250 880 ntBASIC12.48□□□□□ -0.41
Ldb1P70662 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.48□□□□□ -0.41
Ldb1P70662 Gm14760-201ENSMUST00000121831 999 ntBASIC12.48□□□□□ -0.41
Ldb1P70662 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC12.48□□□□□ -0.41
Ldb1P70662 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC12.48□□□□□ -0.41
Ldb1P70662 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC12.48□□□□□ -0.41
Ldb1P70662 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.48□□□□□ -0.41
Ldb1P70662 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC12.48□□□□□ -0.41
Ldb1P70662 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.48□□□□□ -0.41
Ldb1P70662 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12.48□□□□□ -0.41
Ldb1P70662 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Ldb1P70662 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ldb1P70662 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ldb1P70662 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Ldb1P70662 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC12.48□□□□□ -0.41
Ldb1P70662 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Ldb1P70662 n-R5s195-201ENSMUST00000082891 119 ntBASIC12.48□□□□□ -0.41
Ldb1P70662 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ldb1P70662 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ldb1P70662 Daam2-202ENSMUST00000224595 1926 ntBASIC12.48□□□□□ -0.41
Ldb1P70662 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.48□□□□□ -0.41
Ldb1P70662 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ldb1P70662 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ldb1P70662 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ldb1P70662 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.48□□□□□ -0.41
Ldb1P70662 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ldb1P70662 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Ldb1P70662 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ldb1P70662 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ldb1P70662 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ldb1P70662 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ldb1P70662 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ldb1P70662 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ldb1P70662 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Ldb1P70662 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ldb1P70662 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ldb1P70662 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ldb1P70662 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ldb1P70662 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ldb1P70662 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC12.47□□□□□ -0.41
Ldb1P70662 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms