Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Crnkl1P63154 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Crnkl1P63154 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Crnkl1P63154 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.46□□□□□ -0.41
Crnkl1P63154 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Crnkl1P63154 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Crnkl1P63154 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Crnkl1P63154 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Crnkl1P63154 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Crnkl1P63154 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Crnkl1P63154 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.42
Crnkl1P63154 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Crnkl1P63154 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC12.45□□□□□ -0.42
Crnkl1P63154 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
Crnkl1P63154 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Crnkl1P63154 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Crnkl1P63154 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.45□□□□□ -0.42
Crnkl1P63154 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Crnkl1P63154 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Crnkl1P63154 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Crnkl1P63154 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Crnkl1P63154 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Crnkl1P63154 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Crnkl1P63154 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Crnkl1P63154 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Crnkl1P63154 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Crnkl1P63154 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Crnkl1P63154 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC12.45□□□□□ -0.42
Crnkl1P63154 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Crnkl1P63154 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.45□□□□□ -0.42
Crnkl1P63154 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC12.45□□□□□ -0.42
Crnkl1P63154 Gm19220-201ENSMUST00000222682 803 ntBASIC12.45□□□□□ -0.42
Crnkl1P63154 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Crnkl1P63154 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Crnkl1P63154 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Crnkl1P63154 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Crnkl1P63154 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Crnkl1P63154 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Crnkl1P63154 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Crnkl1P63154 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Crnkl1P63154 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Crnkl1P63154 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Crnkl1P63154 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Crnkl1P63154 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Crnkl1P63154 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Crnkl1P63154 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Crnkl1P63154 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Crnkl1P63154 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Crnkl1P63154 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC12.44□□□□□ -0.42
Crnkl1P63154 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Crnkl1P63154 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Crnkl1P63154 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Crnkl1P63154 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Crnkl1P63154 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Crnkl1P63154 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Crnkl1P63154 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.44□□□□□ -0.42
Crnkl1P63154 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Crnkl1P63154 Gm9630-201ENSMUST00000178304 885 ntBASIC12.44□□□□□ -0.42
Crnkl1P63154 Arhgef33-209ENSMUST00000225223 714 ntBASIC12.44□□□□□ -0.42
Crnkl1P63154 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Crnkl1P63154 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Crnkl1P63154 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.44□□□□□ -0.42
Crnkl1P63154 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Crnkl1P63154 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Crnkl1P63154 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Crnkl1P63154 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Crnkl1P63154 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Crnkl1P63154 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Crnkl1P63154 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Crnkl1P63154 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Crnkl1P63154 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Crnkl1P63154 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Crnkl1P63154 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.43□□□□□ -0.42
Crnkl1P63154 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Crnkl1P63154 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Crnkl1P63154 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Crnkl1P63154 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Crnkl1P63154 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Crnkl1P63154 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Crnkl1P63154 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Crnkl1P63154 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Crnkl1P63154 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Crnkl1P63154 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Crnkl1P63154 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Crnkl1P63154 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Crnkl1P63154 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
Crnkl1P63154 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.43□□□□□ -0.42
Crnkl1P63154 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Crnkl1P63154 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Crnkl1P63154 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.43□□□□□ -0.42
Crnkl1P63154 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Crnkl1P63154 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Crnkl1P63154 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC12.43□□□□□ -0.42
Crnkl1P63154 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC12.43□□□□□ -0.42
Crnkl1P63154 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Crnkl1P63154 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Crnkl1P63154 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Crnkl1P63154 Gm28631-201ENSMUST00000190740 334 ntBASIC12.43□□□□□ -0.42
Crnkl1P63154 AL593843.1-201ENSMUST00000195891 145 ntBASIC12.43□□□□□ -0.42
Crnkl1P63154 Gtpbp10-211ENSMUST00000198799 648 ntBASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms