Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ybx1P62960 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ybx1P62960 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC12.86□□□□□ -0.35
Ybx1P62960 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ybx1P62960 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ybx1P62960 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ybx1P62960 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ybx1P62960 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC12.86□□□□□ -0.35
Ybx1P62960 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC12.86□□□□□ -0.35
Ybx1P62960 Gm17040-202ENSMUST00000170597 889 ntBASIC12.86□□□□□ -0.35
Ybx1P62960 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ybx1P62960 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC12.86□□□□□ -0.35
Ybx1P62960 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ybx1P62960 Gm9555-201ENSMUST00000200908 583 ntBASIC12.86□□□□□ -0.35
Ybx1P62960 Gm45598-202ENSMUST00000210719 986 ntBASIC12.86□□□□□ -0.35
Ybx1P62960 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ybx1P62960 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ybx1P62960 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC12.86□□□□□ -0.35
Ybx1P62960 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.86□□□□□ -0.35
Ybx1P62960 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ybx1P62960 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ybx1P62960 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ybx1P62960 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Ybx1P62960 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ybx1P62960 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ybx1P62960 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Ybx1P62960 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ybx1P62960 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Ybx1P62960 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ybx1P62960 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ybx1P62960 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ybx1P62960 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.85□□□□□ -0.35
Ybx1P62960 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ybx1P62960 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ybx1P62960 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ybx1P62960 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ybx1P62960 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Ybx1P62960 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC12.85□□□□□ -0.35
Ybx1P62960 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ybx1P62960 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.85□□□□□ -0.35
Ybx1P62960 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC12.85□□□□□ -0.35
Ybx1P62960 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ybx1P62960 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ybx1P62960 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ybx1P62960 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC12.85□□□□□ -0.35
Ybx1P62960 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC12.85□□□□□ -0.35
Ybx1P62960 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.85□□□□□ -0.35
Ybx1P62960 AC107638.1-201ENSMUST00000213690 1061 ntBASIC12.85□□□□□ -0.35
Ybx1P62960 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC12.85□□□□□ -0.35
Ybx1P62960 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ybx1P62960 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Ybx1P62960 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
Ybx1P62960 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ybx1P62960 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ybx1P62960 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Ybx1P62960 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.85□□□□□ -0.35
Ybx1P62960 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ybx1P62960 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.85□□□□□ -0.35
Ybx1P62960 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ybx1P62960 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ybx1P62960 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ybx1P62960 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ybx1P62960 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ybx1P62960 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ybx1P62960 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ybx1P62960 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ybx1P62960 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ybx1P62960 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC12.84□□□□□ -0.35
Ybx1P62960 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Ybx1P62960 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ybx1P62960 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ybx1P62960 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Ybx1P62960 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ybx1P62960 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ybx1P62960 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ybx1P62960 Gm12314-201ENSMUST00000118104 538 ntBASIC12.84□□□□□ -0.35
Ybx1P62960 Gm12380-201ENSMUST00000119012 544 ntBASIC12.84□□□□□ -0.35
Ybx1P62960 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
Ybx1P62960 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.84□□□□□ -0.35
Ybx1P62960 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.84□□□□□ -0.35
Ybx1P62960 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC12.84□□□□□ -0.35
Ybx1P62960 Aprt-ps-201ENSMUST00000212311 505 ntBASIC12.84□□□□□ -0.35
Ybx1P62960 Gm18730-201ENSMUST00000218038 343 ntBASIC12.84□□□□□ -0.35
Ybx1P62960 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ybx1P62960 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ybx1P62960 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ybx1P62960 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ybx1P62960 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ybx1P62960 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ybx1P62960 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ybx1P62960 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ybx1P62960 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ybx1P62960 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ybx1P62960 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ybx1P62960 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ybx1P62960 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Ybx1P62960 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ybx1P62960 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ybx1P62960 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Ybx1P62960 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms