Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Sssca1P56873 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC10.14□□□□□ -0.79
Sssca1P56873 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Sssca1P56873 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Sssca1P56873 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Sssca1P56873 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Sssca1P56873 Gm14921-201ENSMUST00000118643 908 ntBASIC10.14□□□□□ -0.79
Sssca1P56873 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Sssca1P56873 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC10.14□□□□□ -0.79
Sssca1P56873 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC10.14□□□□□ -0.79
Sssca1P56873 Gm42929-201ENSMUST00000198374 1286 ntBASIC10.14□□□□□ -0.79
Sssca1P56873 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC10.14□□□□□ -0.79
Sssca1P56873 Gm6218-201ENSMUST00000219812 628 ntBASIC10.14□□□□□ -0.79
Sssca1P56873 Gm18473-201ENSMUST00000220543 868 ntBASIC10.14□□□□□ -0.79
Sssca1P56873 AC154687.2-201ENSMUST00000223853 640 ntBASIC10.14□□□□□ -0.79
Sssca1P56873 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Sssca1P56873 Gm5867-201ENSMUST00000063197 592 ntBASIC10.14□□□□□ -0.79
Sssca1P56873 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC10.14□□□□□ -0.79
Sssca1P56873 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Sssca1P56873 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Sssca1P56873 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Sssca1P56873 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Sssca1P56873 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Sssca1P56873 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Sssca1P56873 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Sssca1P56873 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Sssca1P56873 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Sssca1P56873 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC10.14□□□□□ -0.79
Sssca1P56873 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Sssca1P56873 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Sssca1P56873 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Sssca1P56873 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Sssca1P56873 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Sssca1P56873 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Sssca1P56873 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC10.14□□□□□ -0.79
Sssca1P56873 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Sssca1P56873 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Sssca1P56873 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC10.13□□□□□ -0.79
Sssca1P56873 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Sssca1P56873 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
Sssca1P56873 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Sssca1P56873 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC10.13□□□□□ -0.79
Sssca1P56873 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC10.13□□□□□ -0.79
Sssca1P56873 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC10.13□□□□□ -0.79
Sssca1P56873 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Sssca1P56873 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Sssca1P56873 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Sssca1P56873 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC10.13□□□□□ -0.79
Sssca1P56873 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Sssca1P56873 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Sssca1P56873 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Sssca1P56873 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Sssca1P56873 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Sssca1P56873 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Sssca1P56873 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Sssca1P56873 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Sssca1P56873 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Sssca1P56873 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Sssca1P56873 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Sssca1P56873 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Sssca1P56873 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Sssca1P56873 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Sssca1P56873 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC10.13□□□□□ -0.79
Sssca1P56873 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC10.13□□□□□ -0.79
Sssca1P56873 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC10.13□□□□□ -0.79
Sssca1P56873 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC10.13□□□□□ -0.79
Sssca1P56873 Mir7654-201ENSMUST00000185082 70 ntBASIC10.13□□□□□ -0.79
Sssca1P56873 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC10.13□□□□□ -0.79
Sssca1P56873 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Sssca1P56873 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC10.13□□□□□ -0.79
Sssca1P56873 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
Sssca1P56873 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Sssca1P56873 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Sssca1P56873 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
Sssca1P56873 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Sssca1P56873 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Sssca1P56873 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Sssca1P56873 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Sssca1P56873 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Sssca1P56873 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC10.13□□□□□ -0.79
Sssca1P56873 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC10.13□□□□□ -0.79
Sssca1P56873 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Sssca1P56873 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Sssca1P56873 AC166574.4-201ENSMUST00000227165 1937 ntBASIC10.13□□□□□ -0.79
Sssca1P56873 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Sssca1P56873 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Sssca1P56873 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Sssca1P56873 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC10.13□□□□□ -0.79
Sssca1P56873 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Sssca1P56873 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC10.12□□□□□ -0.79
Sssca1P56873 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Sssca1P56873 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Sssca1P56873 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Sssca1P56873 Gm2238-201ENSMUST00000192074 3669 ntBASIC10.12□□□□□ -0.79
Sssca1P56873 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Sssca1P56873 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Sssca1P56873 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Sssca1P56873 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Sssca1P56873 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Sssca1P56873 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms