Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Fdft1P53798 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Fdft1P53798 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Fdft1P53798 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Fdft1P53798 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Fdft1P53798 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Fdft1P53798 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Fdft1P53798 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Fdft1P53798 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Fdft1P53798 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Fdft1P53798 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Fdft1P53798 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Fdft1P53798 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Fdft1P53798 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Fdft1P53798 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Fdft1P53798 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.56□□□□□ -0.4
Fdft1P53798 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Fdft1P53798 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.56□□□□□ -0.4
Fdft1P53798 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Fdft1P53798 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Fdft1P53798 Gm8131-201ENSMUST00000213783 1570 ntBASIC12.56□□□□□ -0.4
Fdft1P53798 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Fdft1P53798 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Fdft1P53798 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Fdft1P53798 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Fdft1P53798 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Fdft1P53798 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Fdft1P53798 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Fdft1P53798 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Fdft1P53798 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Fdft1P53798 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Fdft1P53798 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Fdft1P53798 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Fdft1P53798 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Fdft1P53798 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
Fdft1P53798 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
Fdft1P53798 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.56□□□□□ -0.4
Fdft1P53798 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Fdft1P53798 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.56□□□□□ -0.4
Fdft1P53798 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.56□□□□□ -0.4
Fdft1P53798 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.56□□□□□ -0.4
Fdft1P53798 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
Fdft1P53798 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Fdft1P53798 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.56□□□□□ -0.4
Fdft1P53798 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Fdft1P53798 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Fdft1P53798 Gm45053-201ENSMUST00000206112 2499 ntBASIC12.56□□□□□ -0.4
Fdft1P53798 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Fdft1P53798 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Fdft1P53798 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Fdft1P53798 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Fdft1P53798 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Fdft1P53798 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.56□□□□□ -0.4
Fdft1P53798 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
Fdft1P53798 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Fdft1P53798 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Fdft1P53798 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Fdft1P53798 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Fdft1P53798 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Fdft1P53798 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Fdft1P53798 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Fdft1P53798 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Fdft1P53798 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Fdft1P53798 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Fdft1P53798 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Fdft1P53798 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Fdft1P53798 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Fdft1P53798 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Fdft1P53798 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.55□□□□□ -0.4
Fdft1P53798 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Fdft1P53798 Gm23363-201ENSMUST00000175024 79 ntBASIC12.55□□□□□ -0.4
Fdft1P53798 Gm22121-201ENSMUST00000175148 54 ntBASIC12.55□□□□□ -0.4
Fdft1P53798 Gm7063-201ENSMUST00000186840 981 ntBASIC12.55□□□□□ -0.4
Fdft1P53798 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC12.55□□□□□ -0.4
Fdft1P53798 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC12.55□□□□□ -0.4
Fdft1P53798 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Fdft1P53798 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Fdft1P53798 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.55□□□□□ -0.4
Fdft1P53798 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Fdft1P53798 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Fdft1P53798 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Fdft1P53798 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Fdft1P53798 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Fdft1P53798 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Fdft1P53798 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.55□□□□□ -0.4
Fdft1P53798 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Fdft1P53798 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Fdft1P53798 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Fdft1P53798 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Fdft1P53798 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Fdft1P53798 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Fdft1P53798 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Fdft1P53798 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Fdft1P53798 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Fdft1P53798 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC12.54□□□□□ -0.4
Fdft1P53798 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Fdft1P53798 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Fdft1P53798 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Fdft1P53798 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Fdft1P53798 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms