Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lbx1P52955 AC154257.1-202ENSMUST00000224729 843 ntBASIC12.18□□□□□ -0.46
Lbx1P52955 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lbx1P52955 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lbx1P52955 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Lbx1P52955 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.18□□□□□ -0.46
Lbx1P52955 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Lbx1P52955 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lbx1P52955 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lbx1P52955 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lbx1P52955 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lbx1P52955 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lbx1P52955 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lbx1P52955 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lbx1P52955 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lbx1P52955 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lbx1P52955 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lbx1P52955 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lbx1P52955 Lonp2-207ENSMUST00000163987 1556 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Lbx1P52955 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC12.18□□□□□ -0.46
Lbx1P52955 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Lbx1P52955 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lbx1P52955 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Lbx1P52955 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lbx1P52955 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lbx1P52955 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
Lbx1P52955 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Lbx1P52955 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lbx1P52955 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
Lbx1P52955 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lbx1P52955 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lbx1P52955 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
Lbx1P52955 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC12.17□□□□□ -0.46
Lbx1P52955 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Lbx1P52955 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC12.17□□□□□ -0.46
Lbx1P52955 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lbx1P52955 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC12.17□□□□□ -0.46
Lbx1P52955 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC12.17□□□□□ -0.46
Lbx1P52955 Pradc1-204ENSMUST00000126805 953 ntTSL 2 BASIC12.17□□□□□ -0.46
Lbx1P52955 Gm2044-201ENSMUST00000130771 911 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Lbx1P52955 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC12.17□□□□□ -0.46
Lbx1P52955 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC12.17□□□□□ -0.46
Lbx1P52955 Gm12676-201ENSMUST00000149078 808 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Lbx1P52955 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lbx1P52955 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lbx1P52955 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Lbx1P52955 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Lbx1P52955 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Lbx1P52955 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Lbx1P52955 Gm8100-201ENSMUST00000182906 988 ntBASIC12.17□□□□□ -0.46
Lbx1P52955 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC12.17□□□□□ -0.46
Lbx1P52955 Gm44158-201ENSMUST00000203881 505 ntBASIC12.17□□□□□ -0.46
Lbx1P52955 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.17□□□□□ -0.46
Lbx1P52955 AC102368.1-201ENSMUST00000227161 892 ntBASIC12.17□□□□□ -0.46
Lbx1P52955 H2-Aa-201ENSMUST00000040655 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lbx1P52955 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lbx1P52955 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
Lbx1P52955 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lbx1P52955 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lbx1P52955 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lbx1P52955 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lbx1P52955 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Lbx1P52955 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Lbx1P52955 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lbx1P52955 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lbx1P52955 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lbx1P52955 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lbx1P52955 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lbx1P52955 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lbx1P52955 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Lbx1P52955 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Lbx1P52955 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Lbx1P52955 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Lbx1P52955 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lbx1P52955 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Lbx1P52955 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lbx1P52955 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC12.17□□□□□ -0.46
Lbx1P52955 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lbx1P52955 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lbx1P52955 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lbx1P52955 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lbx1P52955 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lbx1P52955 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lbx1P52955 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lbx1P52955 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Lbx1P52955 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.16□□□□□ -0.46
Lbx1P52955 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lbx1P52955 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lbx1P52955 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Lbx1P52955 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Lbx1P52955 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lbx1P52955 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.16□□□□□ -0.46
Lbx1P52955 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Lbx1P52955 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lbx1P52955 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.16□□□□□ -0.46
Lbx1P52955 Gm8199-201ENSMUST00000121323 823 ntBASIC12.16□□□□□ -0.46
Lbx1P52955 Gm15506-201ENSMUST00000148776 1133 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Lbx1P52955 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC12.16□□□□□ -0.46
Lbx1P52955 Gm24398-201ENSMUST00000157870 109 ntBASIC12.16□□□□□ -0.46
Lbx1P52955 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 138.5 ms