Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shmt1P50431 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shmt1P50431 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shmt1P50431 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shmt1P50431 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shmt1P50431 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Shmt1P50431 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Shmt1P50431 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Shmt1P50431 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Shmt1P50431 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Shmt1P50431 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Shmt1P50431 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Shmt1P50431 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Shmt1P50431 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Shmt1P50431 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Shmt1P50431 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Shmt1P50431 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Shmt1P50431 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Shmt1P50431 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Shmt1P50431 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Shmt1P50431 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC13.27□□□□□ -0.29
Shmt1P50431 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Shmt1P50431 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Shmt1P50431 Gm18304-201ENSMUST00000189162 546 ntBASIC13.27□□□□□ -0.29
Shmt1P50431 Gm31256-201ENSMUST00000194705 506 ntBASIC13.27□□□□□ -0.29
Shmt1P50431 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC13.27□□□□□ -0.29
Shmt1P50431 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Shmt1P50431 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Shmt1P50431 Gm10076-201ENSMUST00000073238 384 ntBASIC13.27□□□□□ -0.29
Shmt1P50431 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC13.27□□□□□ -0.29
Shmt1P50431 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Shmt1P50431 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Shmt1P50431 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Shmt1P50431 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Shmt1P50431 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Shmt1P50431 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Shmt1P50431 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Shmt1P50431 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Shmt1P50431 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Shmt1P50431 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Shmt1P50431 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Shmt1P50431 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Shmt1P50431 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Shmt1P50431 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Shmt1P50431 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Shmt1P50431 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Shmt1P50431 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Shmt1P50431 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Shmt1P50431 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Shmt1P50431 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Shmt1P50431 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Shmt1P50431 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Shmt1P50431 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC13.26□□□□□ -0.29
Shmt1P50431 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Shmt1P50431 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Shmt1P50431 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Shmt1P50431 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Shmt1P50431 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Shmt1P50431 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Shmt1P50431 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Shmt1P50431 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC13.26□□□□□ -0.29
Shmt1P50431 Gm18827-201ENSMUST00000188341 790 ntBASIC13.26□□□□□ -0.29
Shmt1P50431 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Shmt1P50431 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Shmt1P50431 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.26□□□□□ -0.29
Shmt1P50431 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Shmt1P50431 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Shmt1P50431 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Shmt1P50431 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Shmt1P50431 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Shmt1P50431 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Shmt1P50431 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Shmt1P50431 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Shmt1P50431 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC13.26□□□□□ -0.29
Shmt1P50431 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Shmt1P50431 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Shmt1P50431 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Shmt1P50431 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Shmt1P50431 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Shmt1P50431 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Shmt1P50431 Gm38385-201ENSMUST00000194454 2351 ntBASIC13.25□□□□□ -0.29
Shmt1P50431 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shmt1P50431 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Shmt1P50431 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shmt1P50431 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shmt1P50431 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shmt1P50431 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shmt1P50431 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shmt1P50431 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Shmt1P50431 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shmt1P50431 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shmt1P50431 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Shmt1P50431 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shmt1P50431 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shmt1P50431 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shmt1P50431 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Shmt1P50431 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shmt1P50431 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shmt1P50431 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shmt1P50431 Gm14832-201ENSMUST00000121289 322 ntBASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms