Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ercc3P49135 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Ercc3P49135 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ercc3P49135 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ercc3P49135 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Ercc3P49135 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC14.93□□□□□ -0.02
Ercc3P49135 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ercc3P49135 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Ercc3P49135 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ercc3P49135 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ercc3P49135 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ercc3P49135 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ercc3P49135 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ercc3P49135 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ercc3P49135 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ercc3P49135 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Ercc3P49135 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Ercc3P49135 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ercc3P49135 Gm11964-201ENSMUST00000120982 444 ntBASIC14.92□□□□□ -0.02
Ercc3P49135 Gm2991-201ENSMUST00000173338 480 ntBASIC14.92□□□□□ -0.02
Ercc3P49135 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ercc3P49135 Mospd4-201ENSMUST00000180618 576 ntBASIC14.92□□□□□ -0.02
Ercc3P49135 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC14.92□□□□□ -0.02
Ercc3P49135 Gm6621-201ENSMUST00000193251 772 ntBASIC14.92□□□□□ -0.02
Ercc3P49135 Gm43179-201ENSMUST00000198797 275 ntBASIC14.92□□□□□ -0.02
Ercc3P49135 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC14.92□□□□□ -0.02
Ercc3P49135 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC14.92□□□□□ -0.02
Ercc3P49135 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ercc3P49135 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ercc3P49135 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ercc3P49135 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC14.92□□□□□ -0.02
Ercc3P49135 Gm44942-201ENSMUST00000096093 2072 ntBASIC14.92□□□□□ -0.02
Ercc3P49135 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ercc3P49135 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ercc3P49135 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ercc3P49135 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ercc3P49135 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ercc3P49135 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
Ercc3P49135 Gm7789-202ENSMUST00000211273 1400 ntBASIC14.92□□□□□ -0.02
Ercc3P49135 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ercc3P49135 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ercc3P49135 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ercc3P49135 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ercc3P49135 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ercc3P49135 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ercc3P49135 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ercc3P49135 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ercc3P49135 Gm43858-201ENSMUST00000199418 1778 ntBASIC14.91□□□□□ -0.02
Ercc3P49135 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ercc3P49135 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ercc3P49135 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC14.91□□□□□ -0.02
Ercc3P49135 Gm19221-201ENSMUST00000221827 1477 ntBASIC14.91□□□□□ -0.02
Ercc3P49135 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ercc3P49135 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC14.91□□□□□ -0.02
Ercc3P49135 Gm14921-201ENSMUST00000118643 908 ntBASIC14.91□□□□□ -0.02
Ercc3P49135 Gm14723-201ENSMUST00000118686 215 ntBASIC14.91□□□□□ -0.02
Ercc3P49135 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ercc3P49135 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC14.91□□□□□ -0.02
Ercc3P49135 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC14.91□□□□□ -0.02
Ercc3P49135 Gm42627-201ENSMUST00000197347 224 ntBASIC14.91□□□□□ -0.02
Ercc3P49135 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ercc3P49135 Gm19963-201ENSMUST00000208413 1255 ntBASIC14.91□□□□□ -0.02
Ercc3P49135 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ercc3P49135 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ercc3P49135 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Ercc3P49135 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC14.91□□□□□ -0.02
Ercc3P49135 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Ercc3P49135 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ercc3P49135 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ercc3P49135 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ercc3P49135 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ercc3P49135 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Ercc3P49135 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ercc3P49135 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC14.91□□□□□ -0.02
Ercc3P49135 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ercc3P49135 Gm43721-201ENSMUST00000199677 2313 ntBASIC14.91□□□□□ -0.02
Ercc3P49135 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC14.91□□□□□ -0.02
Ercc3P49135 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ercc3P49135 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ercc3P49135 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ercc3P49135 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ercc3P49135 Gm38355-201ENSMUST00000192514 1570 ntBASIC14.9□□□□□ -0.02
Ercc3P49135 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ercc3P49135 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ercc3P49135 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Ercc3P49135 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ercc3P49135 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Ercc3P49135 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ercc3P49135 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ercc3P49135 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
Ercc3P49135 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ercc3P49135 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
Ercc3P49135 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC14.9□□□□□ -0.02
Ercc3P49135 Gm11597-201ENSMUST00000121423 964 ntBASIC14.9□□□□□ -0.02
Ercc3P49135 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC14.9□□□□□ -0.02
Ercc3P49135 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC14.9□□□□□ -0.02
Ercc3P49135 Gm7895-201ENSMUST00000187459 1173 ntBASIC14.9□□□□□ -0.02
Ercc3P49135 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
Ercc3P49135 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC14.9□□□□□ -0.02
Ercc3P49135 Gm37489-201ENSMUST00000191883 159 ntBASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms