Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Prox1P48437 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Prox1P48437 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Prox1P48437 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Prox1P48437 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Prox1P48437 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Prox1P48437 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC12.08□□□□□ -0.47
Prox1P48437 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Prox1P48437 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.08□□□□□ -0.48
Prox1P48437 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Prox1P48437 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Prox1P48437 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Prox1P48437 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
Prox1P48437 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC12.08□□□□□ -0.48
Prox1P48437 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Prox1P48437 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Prox1P48437 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC12.08□□□□□ -0.48
Prox1P48437 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Prox1P48437 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Prox1P48437 Gm45195-201ENSMUST00000205597 1008 ntBASIC12.08□□□□□ -0.48
Prox1P48437 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC12.08□□□□□ -0.48
Prox1P48437 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Prox1P48437 AC124732.1-201ENSMUST00000221551 910 ntBASIC12.08□□□□□ -0.48
Prox1P48437 Gm19220-201ENSMUST00000222682 803 ntBASIC12.08□□□□□ -0.48
Prox1P48437 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Prox1P48437 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Prox1P48437 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Prox1P48437 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Prox1P48437 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Prox1P48437 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Prox1P48437 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Prox1P48437 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Prox1P48437 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Prox1P48437 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Prox1P48437 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Prox1P48437 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Prox1P48437 Gm43102-201ENSMUST00000201004 2324 ntBASIC12.08□□□□□ -0.48
Prox1P48437 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Prox1P48437 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Prox1P48437 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Prox1P48437 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Prox1P48437 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Prox1P48437 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Prox1P48437 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Prox1P48437 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Prox1P48437 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Prox1P48437 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Prox1P48437 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Prox1P48437 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.07□□□□□ -0.48
Prox1P48437 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Prox1P48437 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Prox1P48437 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Prox1P48437 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Prox1P48437 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Prox1P48437 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Prox1P48437 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Prox1P48437 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC12.07□□□□□ -0.48
Prox1P48437 Gm15321-201ENSMUST00000121290 288 ntBASIC12.07□□□□□ -0.48
Prox1P48437 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.07□□□□□ -0.48
Prox1P48437 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Prox1P48437 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Prox1P48437 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Prox1P48437 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC12.07□□□□□ -0.48
Prox1P48437 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Prox1P48437 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.07□□□□□ -0.48
Prox1P48437 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC12.07□□□□□ -0.48
Prox1P48437 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.07□□□□□ -0.48
Prox1P48437 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.07□□□□□ -0.48
Prox1P48437 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Prox1P48437 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.07□□□□□ -0.48
Prox1P48437 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.07□□□□□ -0.48
Prox1P48437 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Prox1P48437 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Prox1P48437 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Prox1P48437 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Prox1P48437 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Prox1P48437 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Prox1P48437 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Prox1P48437 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Prox1P48437 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC12.07□□□□□ -0.48
Prox1P48437 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.07□□□□□ -0.48
Prox1P48437 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Prox1P48437 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Prox1P48437 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Prox1P48437 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Prox1P48437 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Prox1P48437 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Prox1P48437 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Prox1P48437 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Prox1P48437 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Prox1P48437 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Prox1P48437 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Prox1P48437 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Prox1P48437 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Prox1P48437 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Prox1P48437 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Prox1P48437 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Prox1P48437 Gm6211-201ENSMUST00000147973 4275 ntBASIC12.06□□□□□ -0.48
Prox1P48437 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Prox1P48437 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms