Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Rfx3P48381 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC11.36□□□□□ -0.59
Rfx3P48381 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rfx3P48381 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rfx3P48381 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC11.36□□□□□ -0.59
Rfx3P48381 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Rfx3P48381 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC11.36□□□□□ -0.59
Rfx3P48381 Gm15806-201ENSMUST00000120696 955 ntBASIC11.36□□□□□ -0.59
Rfx3P48381 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Rfx3P48381 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Rfx3P48381 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Rfx3P48381 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Rfx3P48381 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC11.36□□□□□ -0.59
Rfx3P48381 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Rfx3P48381 Proscos-202ENSMUST00000178990 666 ntBASIC11.36□□□□□ -0.59
Rfx3P48381 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Rfx3P48381 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC11.36□□□□□ -0.59
Rfx3P48381 Gm37922-201ENSMUST00000195596 455 ntBASIC11.36□□□□□ -0.59
Rfx3P48381 Gm8598-201ENSMUST00000221184 836 ntBASIC11.36□□□□□ -0.59
Rfx3P48381 AC134254.1-201ENSMUST00000221362 167 ntBASIC11.36□□□□□ -0.59
Rfx3P48381 AC110817.1-201ENSMUST00000225706 605 ntBASIC11.36□□□□□ -0.59
Rfx3P48381 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rfx3P48381 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rfx3P48381 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rfx3P48381 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Rfx3P48381 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rfx3P48381 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC11.36□□□□□ -0.59
Rfx3P48381 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC11.36□□□□□ -0.59
Rfx3P48381 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rfx3P48381 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rfx3P48381 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rfx3P48381 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Rfx3P48381 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rfx3P48381 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rfx3P48381 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rfx3P48381 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
Rfx3P48381 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.36□□□□□ -0.59
Rfx3P48381 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rfx3P48381 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
Rfx3P48381 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Rfx3P48381 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Rfx3P48381 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Rfx3P48381 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Rfx3P48381 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC11.36□□□□□ -0.59
Rfx3P48381 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC11.35□□□□□ -0.59
Rfx3P48381 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Rfx3P48381 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rfx3P48381 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Rfx3P48381 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Rfx3P48381 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rfx3P48381 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rfx3P48381 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Rfx3P48381 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Rfx3P48381 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rfx3P48381 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rfx3P48381 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Rfx3P48381 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rfx3P48381 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rfx3P48381 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rfx3P48381 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Rfx3P48381 Gm12138-201ENSMUST00000122180 951 ntBASIC11.35□□□□□ -0.59
Rfx3P48381 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC11.35□□□□□ -0.59
Rfx3P48381 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC11.35□□□□□ -0.59
Rfx3P48381 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rfx3P48381 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC11.35□□□□□ -0.59
Rfx3P48381 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC11.35□□□□□ -0.59
Rfx3P48381 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.35□□□□□ -0.59
Rfx3P48381 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Rfx3P48381 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rfx3P48381 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rfx3P48381 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Rfx3P48381 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rfx3P48381 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Rfx3P48381 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rfx3P48381 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rfx3P48381 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rfx3P48381 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Rfx3P48381 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC11.35□□□□□ -0.59
Rfx3P48381 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rfx3P48381 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rfx3P48381 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rfx3P48381 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rfx3P48381 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC11.35□□□□□ -0.59
Rfx3P48381 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Rfx3P48381 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Rfx3P48381 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rfx3P48381 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Rfx3P48381 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.35□□□□□ -0.59
Rfx3P48381 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rfx3P48381 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rfx3P48381 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Rfx3P48381 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Rfx3P48381 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rfx3P48381 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rfx3P48381 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rfx3P48381 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rfx3P48381 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rfx3P48381 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Rfx3P48381 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.34□□□□□ -0.59
Rfx3P48381 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms