Protein–RNA interactions for Protein: P47806

Gli1, Zinc finger protein GLI1, mousemouse

Predictions only

Length 1,111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli1P47806 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.28□□□□□ -0.44
Gli1P47806 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.28□□□□□ -0.44
Gli1P47806 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Gli1P47806 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.28□□□□□ -0.44
Gli1P47806 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Gli1P47806 Gm14723-201ENSMUST00000118686 215 ntBASIC12.28□□□□□ -0.44
Gli1P47806 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC12.28□□□□□ -0.44
Gli1P47806 Gm16177-201ENSMUST00000120728 718 ntBASIC12.28□□□□□ -0.44
Gli1P47806 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Gli1P47806 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Gli1P47806 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Gli1P47806 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.28□□□□□ -0.44
Gli1P47806 Gm18054-201ENSMUST00000207539 555 ntBASIC12.28□□□□□ -0.44
Gli1P47806 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.28□□□□□ -0.44
Gli1P47806 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Gli1P47806 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Gli1P47806 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.28□□□□□ -0.44
Gli1P47806 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.28□□□□□ -0.44
Gli1P47806 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.28□□□□□ -0.44
Gli1P47806 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Gli1P47806 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Gli1P47806 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Gli1P47806 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Gli1P47806 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Gli1P47806 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Gli1P47806 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Gli1P47806 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Gli1P47806 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Gli1P47806 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.28□□□□□ -0.44
Gli1P47806 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Gli1P47806 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Gli1P47806 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Gli1P47806 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Gli1P47806 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Gli1P47806 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Gli1P47806 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Gli1P47806 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Gli1P47806 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Gli1P47806 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Gli1P47806 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Gli1P47806 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Gli1P47806 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Gli1P47806 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.44
Gli1P47806 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.44
Gli1P47806 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Gli1P47806 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Gli1P47806 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Gli1P47806 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.27□□□□□ -0.45
Gli1P47806 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Gli1P47806 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Gli1P47806 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.27□□□□□ -0.45
Gli1P47806 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Gli1P47806 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.27□□□□□ -0.45
Gli1P47806 Gm11803-201ENSMUST00000119966 444 ntBASIC12.27□□□□□ -0.45
Gli1P47806 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.27□□□□□ -0.45
Gli1P47806 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Gli1P47806 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Gli1P47806 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.27□□□□□ -0.45
Gli1P47806 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.27□□□□□ -0.45
Gli1P47806 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.27□□□□□ -0.45
Gli1P47806 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.27□□□□□ -0.45
Gli1P47806 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.27□□□□□ -0.45
Gli1P47806 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.27□□□□□ -0.45
Gli1P47806 Gm9823-201ENSMUST00000051212 327 ntBASIC12.27□□□□□ -0.45
Gli1P47806 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Gli1P47806 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Gli1P47806 Gm17383-201ENSMUST00000078739 1041 ntBASIC12.27□□□□□ -0.45
Gli1P47806 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Gli1P47806 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Gli1P47806 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Gli1P47806 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Gli1P47806 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Gli1P47806 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Gli1P47806 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Gli1P47806 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Gli1P47806 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Gli1P47806 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Gli1P47806 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Gli1P47806 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Gli1P47806 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Gli1P47806 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Gli1P47806 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Gli1P47806 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Gli1P47806 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Gli1P47806 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Gli1P47806 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Gli1P47806 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Gli1P47806 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Gli1P47806 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Gli1P47806 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Gli1P47806 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Gli1P47806 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Gli1P47806 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Gli1P47806 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Gli1P47806 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.26□□□□□ -0.45
Gli1P47806 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.26□□□□□ -0.45
Gli1P47806 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC12.26□□□□□ -0.45
Gli1P47806 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12.26□□□□□ -0.45
Gli1P47806 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Gli1P47806 Gm8810-201ENSMUST00000172895 754 ntBASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 87 ms