Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox18P43680 Tnf-201ENSMUST00000025263 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox18P43680 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Sox18P43680 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox18P43680 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Sox18P43680 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox18P43680 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox18P43680 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox18P43680 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox18P43680 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.18□□□□□ -0.46
Sox18P43680 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox18P43680 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox18P43680 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox18P43680 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Sox18P43680 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.18□□□□□ -0.46
Sox18P43680 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC12.18□□□□□ -0.46
Sox18P43680 Gm13045-201ENSMUST00000119019 712 ntBASIC12.18□□□□□ -0.46
Sox18P43680 Gm11675-201ENSMUST00000121873 832 ntBASIC12.18□□□□□ -0.46
Sox18P43680 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox18P43680 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC12.18□□□□□ -0.46
Sox18P43680 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Sox18P43680 Gm19353-201ENSMUST00000184561 445 ntBASIC12.18□□□□□ -0.46
Sox18P43680 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sox18P43680 Gm10925-201ENSMUST00000189941 678 ntBASIC12.18□□□□□ -0.46
Sox18P43680 Gm37666-201ENSMUST00000194110 866 ntBASIC12.18□□□□□ -0.46
Sox18P43680 Gm10297-201ENSMUST00000207136 651 ntBASIC12.18□□□□□ -0.46
Sox18P43680 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC12.18□□□□□ -0.46
Sox18P43680 Aprt-ps-201ENSMUST00000212311 505 ntBASIC12.18□□□□□ -0.46
Sox18P43680 Gm36278-201ENSMUST00000217030 918 ntTSL 5 BASIC12.18□□□□□ -0.46
Sox18P43680 AC132433.1-201ENSMUST00000221553 1101 ntBASIC12.18□□□□□ -0.46
Sox18P43680 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox18P43680 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Sox18P43680 Gm10312-201ENSMUST00000078515 489 ntBASIC12.18□□□□□ -0.46
Sox18P43680 Gm37863-201ENSMUST00000194911 1457 ntBASIC12.18□□□□□ -0.46
Sox18P43680 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox18P43680 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox18P43680 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sox18P43680 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Sox18P43680 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox18P43680 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox18P43680 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox18P43680 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sox18P43680 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.18□□□□□ -0.46
Sox18P43680 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Sox18P43680 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sox18P43680 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox18P43680 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sox18P43680 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox18P43680 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Sox18P43680 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC12.18□□□□□ -0.46
Sox18P43680 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox18P43680 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
Sox18P43680 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox18P43680 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.17□□□□□ -0.46
Sox18P43680 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox18P43680 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox18P43680 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox18P43680 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox18P43680 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sox18P43680 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sox18P43680 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Sox18P43680 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox18P43680 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sox18P43680 Gm12029-201ENSMUST00000120073 832 ntBASIC12.17□□□□□ -0.46
Sox18P43680 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sox18P43680 Gm27216-202ENSMUST00000184100 635 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sox18P43680 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC12.17□□□□□ -0.46
Sox18P43680 Gm29155-201ENSMUST00000185910 269 ntBASIC12.17□□□□□ -0.46
Sox18P43680 Gm17983-201ENSMUST00000190766 594 ntBASIC12.17□□□□□ -0.46
Sox18P43680 Gm28766-201ENSMUST00000191086 234 ntBASIC12.17□□□□□ -0.46
Sox18P43680 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC12.17□□□□□ -0.46
Sox18P43680 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC12.17□□□□□ -0.46
Sox18P43680 Pip-202ENSMUST00000203244 736 ntTSL 3 BASIC12.17□□□□□ -0.46
Sox18P43680 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC12.17□□□□□ -0.46
Sox18P43680 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.17□□□□□ -0.46
Sox18P43680 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox18P43680 Krtap9-1-201ENSMUST00000093936 1044 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Sox18P43680 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox18P43680 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.17□□□□□ -0.46
Sox18P43680 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox18P43680 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Sox18P43680 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox18P43680 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC12.17□□□□□ -0.46
Sox18P43680 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sox18P43680 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.17□□□□□ -0.46
Sox18P43680 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox18P43680 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Sox18P43680 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sox18P43680 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Sox18P43680 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox18P43680 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox18P43680 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC12.17□□□□□ -0.46
Sox18P43680 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox18P43680 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox18P43680 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Sox18P43680 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox18P43680 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sox18P43680 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sox18P43680 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Sox18P43680 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms