Protein–RNA interactions for Protein: P41105

Rpl28, 60S ribosomal protein L28, mousemouse

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl28P41105 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC8.45□□□□□ -1.06
Rpl28P41105 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Rpl28P41105 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC8.45□□□□□ -1.06
Rpl28P41105 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC8.45□□□□□ -1.06
Rpl28P41105 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Rpl28P41105 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Rpl28P41105 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Rpl28P41105 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC8.45□□□□□ -1.06
Rpl28P41105 Ldb3-207ENSMUST00000227819 1499 ntBASIC8.45□□□□□ -1.06
Rpl28P41105 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Rpl28P41105 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Rpl28P41105 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Rpl28P41105 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Rpl28P41105 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Rpl28P41105 Gm42943-201ENSMUST00000199676 3242 ntBASIC8.45□□□□□ -1.06
Rpl28P41105 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
Rpl28P41105 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
Rpl28P41105 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC8.45□□□□□ -1.06
Rpl28P41105 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Rpl28P41105 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC8.45□□□□□ -1.06
Rpl28P41105 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC8.45□□□□□ -1.06
Rpl28P41105 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC8.45□□□□□ -1.06
Rpl28P41105 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC8.45□□□□□ -1.06
Rpl28P41105 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
Rpl28P41105 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Rpl28P41105 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Rpl28P41105 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC8.45□□□□□ -1.06
Rpl28P41105 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC8.45□□□□□ -1.06
Rpl28P41105 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Rpl28P41105 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC8.45□□□□□ -1.06
Rpl28P41105 Gm26464-201ENSMUST00000157094 305 ntBASIC8.45□□□□□ -1.06
Rpl28P41105 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
Rpl28P41105 Gm38223-201ENSMUST00000194484 695 ntBASIC8.45□□□□□ -1.06
Rpl28P41105 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Rpl28P41105 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Rpl28P41105 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC8.45□□□□□ -1.06
Rpl28P41105 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Rpl28P41105 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Rpl28P41105 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Rpl28P41105 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Rpl28P41105 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Rpl28P41105 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Rpl28P41105 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Rpl28P41105 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Rpl28P41105 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Rpl28P41105 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Rpl28P41105 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Rpl28P41105 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Rpl28P41105 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Rpl28P41105 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Rpl28P41105 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Rpl28P41105 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Rpl28P41105 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC8.45□□□□□ -1.06
Rpl28P41105 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Rpl28P41105 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Rpl28P41105 Gm5859-201ENSMUST00000165401 2324 ntBASIC8.45□□□□□ -1.06
Rpl28P41105 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Rpl28P41105 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Rpl28P41105 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC8.44□□□□□ -1.06
Rpl28P41105 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC8.44□□□□□ -1.06
Rpl28P41105 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Rpl28P41105 AC124577.2-201ENSMUST00000217413 2420 ntBASIC8.44□□□□□ -1.06
Rpl28P41105 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Rpl28P41105 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Rpl28P41105 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Rpl28P41105 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Rpl28P41105 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Rpl28P41105 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Rpl28P41105 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Rpl28P41105 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Rpl28P41105 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Rpl28P41105 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
Rpl28P41105 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Rpl28P41105 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Rpl28P41105 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Rpl28P41105 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
Rpl28P41105 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Rpl28P41105 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Rpl28P41105 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Rpl28P41105 Gm22189-201ENSMUST00000103822 86 ntBASIC8.44□□□□□ -1.06
Rpl28P41105 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Rpl28P41105 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC8.44□□□□□ -1.06
Rpl28P41105 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
Rpl28P41105 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC8.44□□□□□ -1.06
Rpl28P41105 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC8.44□□□□□ -1.06
Rpl28P41105 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Rpl28P41105 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC8.44□□□□□ -1.06
Rpl28P41105 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC8.44□□□□□ -1.06
Rpl28P41105 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC8.44□□□□□ -1.06
Rpl28P41105 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC8.44□□□□□ -1.06
Rpl28P41105 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Rpl28P41105 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
Rpl28P41105 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Rpl28P41105 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC8.44□□□□□ -1.06
Rpl28P41105 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Rpl28P41105 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC8.44□□□□□ -1.06
Rpl28P41105 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC8.44□□□□□ -1.06
Rpl28P41105 Gm28631-201ENSMUST00000190740 334 ntBASIC8.44□□□□□ -1.06
Rpl28P41105 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Rpl28P41105 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC8.44□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 88.3 ms