Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox6P40645 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox6P40645 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox6P40645 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox6P40645 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox6P40645 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sox6P40645 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC11.82□□□□□ -0.52
Sox6P40645 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC11.82□□□□□ -0.52
Sox6P40645 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox6P40645 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox6P40645 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox6P40645 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox6P40645 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox6P40645 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox6P40645 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Sox6P40645 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC11.81□□□□□ -0.52
Sox6P40645 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC11.81□□□□□ -0.52
Sox6P40645 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC11.81□□□□□ -0.52
Sox6P40645 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC11.81□□□□□ -0.52
Sox6P40645 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sox6P40645 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox6P40645 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox6P40645 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox6P40645 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox6P40645 AC122291.1-201ENSMUST00000228937 5748 ntBASIC11.81□□□□□ -0.52
Sox6P40645 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox6P40645 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox6P40645 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sox6P40645 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox6P40645 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox6P40645 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox6P40645 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sox6P40645 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox6P40645 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sox6P40645 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox6P40645 Gm11814-201ENSMUST00000119515 929 ntBASIC11.81□□□□□ -0.52
Sox6P40645 Gm6161-201ENSMUST00000121942 1102 ntBASIC11.81□□□□□ -0.52
Sox6P40645 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Sox6P40645 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sox6P40645 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC11.81□□□□□ -0.52
Sox6P40645 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Sox6P40645 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sox6P40645 Gm6254-201ENSMUST00000168178 1072 ntBASIC11.81□□□□□ -0.52
Sox6P40645 Gm6153-201ENSMUST00000172004 1058 ntBASIC11.81□□□□□ -0.52
Sox6P40645 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Sox6P40645 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Sox6P40645 Gm27839-201ENSMUST00000184242 106 ntBASIC11.81□□□□□ -0.52
Sox6P40645 Gm5641-202ENSMUST00000198699 1080 ntBASIC11.81□□□□□ -0.52
Sox6P40645 Gm5035-201ENSMUST00000215581 927 ntBASIC11.81□□□□□ -0.52
Sox6P40645 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox6P40645 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox6P40645 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox6P40645 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC11.81□□□□□ -0.52
Sox6P40645 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox6P40645 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.81□□□□□ -0.52
Sox6P40645 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox6P40645 Zkscan3-207ENSMUST00000223831 2101 ntBASIC11.81□□□□□ -0.52
Sox6P40645 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC11.81□□□□□ -0.52
Sox6P40645 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox6P40645 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox6P40645 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox6P40645 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox6P40645 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox6P40645 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Sox6P40645 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox6P40645 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
Sox6P40645 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC11.81□□□□□ -0.52
Sox6P40645 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox6P40645 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox6P40645 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Sox6P40645 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox6P40645 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Sox6P40645 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Sox6P40645 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.8□□□□□ -0.52
Sox6P40645 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox6P40645 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox6P40645 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Sox6P40645 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Sox6P40645 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC11.8□□□□□ -0.52
Sox6P40645 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Sox6P40645 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC11.8□□□□□ -0.52
Sox6P40645 Gm8213-201ENSMUST00000118191 441 ntBASIC11.8□□□□□ -0.52
Sox6P40645 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC11.8□□□□□ -0.52
Sox6P40645 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC11.8□□□□□ -0.52
Sox6P40645 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Sox6P40645 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC11.8□□□□□ -0.52
Sox6P40645 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC11.8□□□□□ -0.52
Sox6P40645 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox6P40645 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Sox6P40645 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Sox6P40645 Gm19931-201ENSMUST00000198920 368 ntBASIC11.8□□□□□ -0.52
Sox6P40645 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox6P40645 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox6P40645 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox6P40645 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox6P40645 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox6P40645 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox6P40645 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox6P40645 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox6P40645 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms