Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
TfamP40630 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
TfamP40630 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
TfamP40630 Gm11814-201ENSMUST00000119515 929 ntBASIC12.17□□□□□ -0.46
TfamP40630 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.17□□□□□ -0.46
TfamP40630 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.17□□□□□ -0.46
TfamP40630 Gm22331-201ENSMUST00000158066 136 ntBASIC12.17□□□□□ -0.46
TfamP40630 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.17□□□□□ -0.46
TfamP40630 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.17□□□□□ -0.46
TfamP40630 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.17□□□□□ -0.46
TfamP40630 Gm45059-201ENSMUST00000205558 1077 ntBASIC12.17□□□□□ -0.46
TfamP40630 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TfamP40630 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.17□□□□□ -0.46
TfamP40630 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TfamP40630 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
TfamP40630 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
TfamP40630 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
TfamP40630 Matn2-203ENSMUST00000226766 3252 ntBASIC12.17□□□□□ -0.46
TfamP40630 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
TfamP40630 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TfamP40630 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TfamP40630 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TfamP40630 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.16□□□□□ -0.46
TfamP40630 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TfamP40630 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
TfamP40630 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TfamP40630 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
TfamP40630 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TfamP40630 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.16□□□□□ -0.46
TfamP40630 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.16□□□□□ -0.46
TfamP40630 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.16□□□□□ -0.46
TfamP40630 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.16□□□□□ -0.46
TfamP40630 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.16□□□□□ -0.46
TfamP40630 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
TfamP40630 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TfamP40630 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TfamP40630 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TfamP40630 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TfamP40630 Snord83b-201ENSMUST00000104546 94 ntBASIC12.16□□□□□ -0.46
TfamP40630 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
TfamP40630 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TfamP40630 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.16□□□□□ -0.46
TfamP40630 Gm15806-201ENSMUST00000120696 955 ntBASIC12.16□□□□□ -0.46
TfamP40630 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.16□□□□□ -0.46
TfamP40630 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.16□□□□□ -0.46
TfamP40630 Gm9630-201ENSMUST00000178304 885 ntBASIC12.16□□□□□ -0.46
TfamP40630 Gm27486-201ENSMUST00000184923 80 ntBASIC12.16□□□□□ -0.46
TfamP40630 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.16□□□□□ -0.46
TfamP40630 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.16□□□□□ -0.46
TfamP40630 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
TfamP40630 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.16□□□□□ -0.46
TfamP40630 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
TfamP40630 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.16□□□□□ -0.46
TfamP40630 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
TfamP40630 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TfamP40630 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TfamP40630 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TfamP40630 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
TfamP40630 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
TfamP40630 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TfamP40630 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
TfamP40630 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
TfamP40630 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
TfamP40630 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TfamP40630 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.16□□□□□ -0.46
TfamP40630 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
TfamP40630 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
TfamP40630 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TfamP40630 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TfamP40630 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
TfamP40630 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TfamP40630 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TfamP40630 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12.16□□□□□ -0.46
TfamP40630 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
TfamP40630 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
TfamP40630 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TfamP40630 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TfamP40630 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TfamP40630 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TfamP40630 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TfamP40630 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TfamP40630 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TfamP40630 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.15□□□□□ -0.46
TfamP40630 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.15□□□□□ -0.46
TfamP40630 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TfamP40630 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
TfamP40630 Gm4780-202ENSMUST00000215200 2644 ntBASIC12.15□□□□□ -0.46
TfamP40630 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TfamP40630 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TfamP40630 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TfamP40630 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TfamP40630 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TfamP40630 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.15□□□□□ -0.46
TfamP40630 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
TfamP40630 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TfamP40630 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC12.15□□□□□ -0.46
TfamP40630 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.15□□□□□ -0.46
TfamP40630 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
TfamP40630 H2-Pa-201ENSMUST00000182803 626 ntBASIC12.15□□□□□ -0.46
TfamP40630 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms