Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
HmgclP38060 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
HmgclP38060 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HmgclP38060 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
HmgclP38060 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HmgclP38060 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.38□□□□□ -0.43
HmgclP38060 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.38□□□□□ -0.43
HmgclP38060 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
HmgclP38060 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.38□□□□□ -0.43
HmgclP38060 Gm13342-201ENSMUST00000121055 207 ntBASIC12.38□□□□□ -0.43
HmgclP38060 Gm8062-201ENSMUST00000139696 444 ntBASIC12.38□□□□□ -0.43
HmgclP38060 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
HmgclP38060 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
HmgclP38060 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HmgclP38060 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
HmgclP38060 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
HmgclP38060 Gm18304-201ENSMUST00000189162 546 ntBASIC12.38□□□□□ -0.43
HmgclP38060 Gm38158-201ENSMUST00000194617 339 ntBASIC12.38□□□□□ -0.43
HmgclP38060 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC12.38□□□□□ -0.43
HmgclP38060 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.38□□□□□ -0.43
HmgclP38060 AC153962.4-201ENSMUST00000217878 242 ntBASIC12.38□□□□□ -0.43
HmgclP38060 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
HmgclP38060 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HmgclP38060 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
HmgclP38060 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
HmgclP38060 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HmgclP38060 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
HmgclP38060 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
HmgclP38060 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
HmgclP38060 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HmgclP38060 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HmgclP38060 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HmgclP38060 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HmgclP38060 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HmgclP38060 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HmgclP38060 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.38□□□□□ -0.43
HmgclP38060 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
HmgclP38060 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
HmgclP38060 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
HmgclP38060 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.38□□□□□ -0.43
HmgclP38060 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
HmgclP38060 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
HmgclP38060 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
HmgclP38060 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HmgclP38060 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.37□□□□□ -0.43
HmgclP38060 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HmgclP38060 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HmgclP38060 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
HmgclP38060 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HmgclP38060 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HmgclP38060 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HmgclP38060 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
HmgclP38060 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
HmgclP38060 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
HmgclP38060 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HmgclP38060 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
HmgclP38060 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
HmgclP38060 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HmgclP38060 Gm12742-201ENSMUST00000117326 410 ntBASIC12.37□□□□□ -0.43
HmgclP38060 Gm12058-201ENSMUST00000118614 437 ntBASIC12.37□□□□□ -0.43
HmgclP38060 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
HmgclP38060 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
HmgclP38060 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
HmgclP38060 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC12.37□□□□□ -0.43
HmgclP38060 Gm45880-201ENSMUST00000213041 853 ntBASIC12.37□□□□□ -0.43
HmgclP38060 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HmgclP38060 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC12.37□□□□□ -0.43
HmgclP38060 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.37□□□□□ -0.43
HmgclP38060 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HmgclP38060 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.37□□□□□ -0.43
HmgclP38060 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.37□□□□□ -0.43
HmgclP38060 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
HmgclP38060 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.37□□□□□ -0.43
HmgclP38060 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HmgclP38060 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
HmgclP38060 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
HmgclP38060 Gm43321-201ENSMUST00000198897 2409 ntBASIC12.37□□□□□ -0.43
HmgclP38060 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.37□□□□□ -0.43
HmgclP38060 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
HmgclP38060 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HmgclP38060 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
HmgclP38060 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HmgclP38060 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HmgclP38060 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
HmgclP38060 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HmgclP38060 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
HmgclP38060 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
HmgclP38060 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HmgclP38060 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HmgclP38060 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.36□□□□□ -0.43
HmgclP38060 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
HmgclP38060 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HmgclP38060 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.36□□□□□ -0.43
HmgclP38060 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
HmgclP38060 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
HmgclP38060 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
HmgclP38060 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HmgclP38060 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.36□□□□□ -0.43
HmgclP38060 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HmgclP38060 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms