Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Nfkb1P25799 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nfkb1P25799 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Nfkb1P25799 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Nfkb1P25799 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.93□□□□□ -0.34
Nfkb1P25799 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Nfkb1P25799 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Nfkb1P25799 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nfkb1P25799 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Nfkb1P25799 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nfkb1P25799 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nfkb1P25799 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nfkb1P25799 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.93□□□□□ -0.34
Nfkb1P25799 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nfkb1P25799 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nfkb1P25799 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nfkb1P25799 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nfkb1P25799 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nfkb1P25799 Gm14999-201ENSMUST00000121039 624 ntBASIC12.93□□□□□ -0.34
Nfkb1P25799 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nfkb1P25799 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nfkb1P25799 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Nfkb1P25799 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nfkb1P25799 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.93□□□□□ -0.34
Nfkb1P25799 AC161537.1-201ENSMUST00000226199 1015 ntBASIC12.93□□□□□ -0.34
Nfkb1P25799 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nfkb1P25799 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.93□□□□□ -0.34
Nfkb1P25799 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nfkb1P25799 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Nfkb1P25799 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.93□□□□□ -0.34
Nfkb1P25799 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Nfkb1P25799 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nfkb1P25799 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nfkb1P25799 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nfkb1P25799 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nfkb1P25799 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nfkb1P25799 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Nfkb1P25799 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nfkb1P25799 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nfkb1P25799 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Nfkb1P25799 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Nfkb1P25799 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nfkb1P25799 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nfkb1P25799 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nfkb1P25799 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Nfkb1P25799 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nfkb1P25799 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nfkb1P25799 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
Nfkb1P25799 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nfkb1P25799 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Nfkb1P25799 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nfkb1P25799 Gm13315-201ENSMUST00000120376 991 ntBASIC12.92□□□□□ -0.34
Nfkb1P25799 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.92□□□□□ -0.34
Nfkb1P25799 Gm16570-201ENSMUST00000161951 436 ntBASIC12.92□□□□□ -0.34
Nfkb1P25799 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC12.92□□□□□ -0.34
Nfkb1P25799 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC12.92□□□□□ -0.34
Nfkb1P25799 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nfkb1P25799 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nfkb1P25799 Gm45186-201ENSMUST00000206874 478 ntBASIC12.92□□□□□ -0.34
Nfkb1P25799 Gm39404-201ENSMUST00000216350 313 ntBASIC12.92□□□□□ -0.34
Nfkb1P25799 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.92□□□□□ -0.34
Nfkb1P25799 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nfkb1P25799 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nfkb1P25799 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Nfkb1P25799 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nfkb1P25799 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nfkb1P25799 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Nfkb1P25799 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nfkb1P25799 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.92□□□□□ -0.34
Nfkb1P25799 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nfkb1P25799 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nfkb1P25799 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nfkb1P25799 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nfkb1P25799 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nfkb1P25799 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nfkb1P25799 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.92□□□□□ -0.34
Nfkb1P25799 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nfkb1P25799 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nfkb1P25799 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.91□□□□□ -0.34
Nfkb1P25799 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Nfkb1P25799 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Nfkb1P25799 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nfkb1P25799 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nfkb1P25799 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nfkb1P25799 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nfkb1P25799 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.91□□□□□ -0.34
Nfkb1P25799 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.91□□□□□ -0.34
Nfkb1P25799 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Nfkb1P25799 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.91□□□□□ -0.34
Nfkb1P25799 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nfkb1P25799 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nfkb1P25799 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nfkb1P25799 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nfkb1P25799 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nfkb1P25799 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nfkb1P25799 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nfkb1P25799 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nfkb1P25799 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nfkb1P25799 Gm11597-201ENSMUST00000121423 964 ntBASIC12.91□□□□□ -0.34
Nfkb1P25799 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms