Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sdc1P18828 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Sdc1P18828 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sdc1P18828 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sdc1P18828 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sdc1P18828 AC122811.1-201ENSMUST00000222257 2921 ntBASIC10.26□□□□□ -0.77
Sdc1P18828 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sdc1P18828 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Sdc1P18828 Gm24543-201ENSMUST00000103867 82 ntBASIC10.26□□□□□ -0.77
Sdc1P18828 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC10.26□□□□□ -0.77
Sdc1P18828 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC10.26□□□□□ -0.77
Sdc1P18828 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sdc1P18828 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Sdc1P18828 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC10.26□□□□□ -0.77
Sdc1P18828 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Sdc1P18828 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC10.26□□□□□ -0.77
Sdc1P18828 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC10.26□□□□□ -0.77
Sdc1P18828 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Sdc1P18828 AC174742.1-201ENSMUST00000218272 304 ntBASIC10.26□□□□□ -0.77
Sdc1P18828 AC132317.1-201ENSMUST00000227227 962 ntBASIC10.26□□□□□ -0.77
Sdc1P18828 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sdc1P18828 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sdc1P18828 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sdc1P18828 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sdc1P18828 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC10.26□□□□□ -0.77
Sdc1P18828 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Sdc1P18828 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Sdc1P18828 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC10.26□□□□□ -0.77
Sdc1P18828 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sdc1P18828 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Sdc1P18828 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Sdc1P18828 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sdc1P18828 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Sdc1P18828 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sdc1P18828 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sdc1P18828 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sdc1P18828 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sdc1P18828 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Sdc1P18828 Gm38273-201ENSMUST00000194987 2382 ntBASIC10.25□□□□□ -0.77
Sdc1P18828 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sdc1P18828 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Sdc1P18828 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Sdc1P18828 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sdc1P18828 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sdc1P18828 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sdc1P18828 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sdc1P18828 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sdc1P18828 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Sdc1P18828 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sdc1P18828 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC10.25□□□□□ -0.77
Sdc1P18828 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Sdc1P18828 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Sdc1P18828 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Sdc1P18828 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC10.25□□□□□ -0.77
Sdc1P18828 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sdc1P18828 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sdc1P18828 Gm43267-201ENSMUST00000199664 1796 ntBASIC10.25□□□□□ -0.77
Sdc1P18828 Nrn1-204ENSMUST00000224323 1779 ntBASIC10.25□□□□□ -0.77
Sdc1P18828 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sdc1P18828 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Sdc1P18828 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Sdc1P18828 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sdc1P18828 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC10.25□□□□□ -0.77
Sdc1P18828 Gm15653-201ENSMUST00000119247 907 ntBASIC10.25□□□□□ -0.77
Sdc1P18828 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC10.25□□□□□ -0.77
Sdc1P18828 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC10.25□□□□□ -0.77
Sdc1P18828 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sdc1P18828 Mir8098-201ENSMUST00000184011 137 ntBASIC10.25□□□□□ -0.77
Sdc1P18828 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC10.25□□□□□ -0.77
Sdc1P18828 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC10.25□□□□□ -0.77
Sdc1P18828 Gm5628-201ENSMUST00000222318 1049 ntBASIC10.25□□□□□ -0.77
Sdc1P18828 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sdc1P18828 Gm5161-201ENSMUST00000075243 853 ntBASIC10.25□□□□□ -0.77
Sdc1P18828 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sdc1P18828 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sdc1P18828 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sdc1P18828 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sdc1P18828 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sdc1P18828 Gm17230-201ENSMUST00000171194 3942 ntBASIC10.25□□□□□ -0.77
Sdc1P18828 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sdc1P18828 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Sdc1P18828 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sdc1P18828 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sdc1P18828 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sdc1P18828 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sdc1P18828 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sdc1P18828 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sdc1P18828 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sdc1P18828 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sdc1P18828 Gm45532-201ENSMUST00000210342 3620 ntBASIC10.25□□□□□ -0.77
Sdc1P18828 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Sdc1P18828 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sdc1P18828 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sdc1P18828 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sdc1P18828 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sdc1P18828 Gm44260-201ENSMUST00000204946 2094 ntBASIC10.24□□□□□ -0.77
Sdc1P18828 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sdc1P18828 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sdc1P18828 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sdc1P18828 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms