Protein–RNA interactions for Protein: P18181

Cd48, CD48 antigen, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd48P18181 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cd48P18181 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cd48P18181 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cd48P18181 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC11.28□□□□□ -0.6
Cd48P18181 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cd48P18181 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cd48P18181 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Cd48P18181 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC11.28□□□□□ -0.6
Cd48P18181 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cd48P18181 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cd48P18181 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
Cd48P18181 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Cd48P18181 Gm45684-201ENSMUST00000210244 1571 ntBASIC11.28□□□□□ -0.6
Cd48P18181 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cd48P18181 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.28□□□□□ -0.6
Cd48P18181 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC11.28□□□□□ -0.6
Cd48P18181 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cd48P18181 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cd48P18181 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC11.27□□□□□ -0.6
Cd48P18181 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cd48P18181 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC11.27□□□□□ -0.6
Cd48P18181 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Cd48P18181 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cd48P18181 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Cd48P18181 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Cd48P18181 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cd48P18181 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC11.27□□□□□ -0.6
Cd48P18181 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC11.27□□□□□ -0.6
Cd48P18181 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.6
Cd48P18181 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC11.27□□□□□ -0.6
Cd48P18181 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cd48P18181 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.6
Cd48P18181 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cd48P18181 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cd48P18181 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cd48P18181 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cd48P18181 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cd48P18181 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cd48P18181 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cd48P18181 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cd48P18181 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Cd48P18181 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Cd48P18181 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC11.27□□□□□ -0.61
Cd48P18181 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cd48P18181 Mup-ps23-201ENSMUST00000118063 630 ntBASIC11.27□□□□□ -0.61
Cd48P18181 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cd48P18181 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cd48P18181 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cd48P18181 Gm26185-201ENSMUST00000157692 266 ntBASIC11.27□□□□□ -0.61
Cd48P18181 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC11.27□□□□□ -0.61
Cd48P18181 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cd48P18181 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC11.27□□□□□ -0.61
Cd48P18181 Gm23363-201ENSMUST00000175024 79 ntBASIC11.27□□□□□ -0.61
Cd48P18181 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC11.27□□□□□ -0.61
Cd48P18181 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cd48P18181 AC134254.1-201ENSMUST00000221362 167 ntBASIC11.27□□□□□ -0.61
Cd48P18181 Gm2824-203ENSMUST00000226189 1228 ntBASIC11.27□□□□□ -0.61
Cd48P18181 AC154239.3-201ENSMUST00000226933 674 ntBASIC11.27□□□□□ -0.61
Cd48P18181 CT025535.1-201ENSMUST00000227172 491 ntBASIC11.27□□□□□ -0.61
Cd48P18181 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cd48P18181 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cd48P18181 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cd48P18181 Mir339-201ENSMUST00000083659 96 ntBASIC11.27□□□□□ -0.61
Cd48P18181 n-R5s77-201ENSMUST00000083757 119 ntBASIC11.27□□□□□ -0.61
Cd48P18181 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cd48P18181 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cd48P18181 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cd48P18181 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cd48P18181 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cd48P18181 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cd48P18181 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Cd48P18181 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC11.27□□□□□ -0.61
Cd48P18181 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cd48P18181 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cd48P18181 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cd48P18181 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cd48P18181 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cd48P18181 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cd48P18181 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cd48P18181 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cd48P18181 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC11.27□□□□□ -0.61
Cd48P18181 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Cd48P18181 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cd48P18181 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cd48P18181 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cd48P18181 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cd48P18181 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cd48P18181 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cd48P18181 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cd48P18181 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cd48P18181 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cd48P18181 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cd48P18181 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cd48P18181 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cd48P18181 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Cd48P18181 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cd48P18181 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cd48P18181 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cd48P18181 AC157950.1-201ENSMUST00000217561 2168 ntBASIC11.26□□□□□ -0.61
Cd48P18181 Gm38187-201ENSMUST00000195609 4709 ntBASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms