Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rb1P13405 Gm18584-201ENSMUST00000203098 964 ntBASIC12.94□□□□□ -0.34
Rb1P13405 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rb1P13405 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC12.94□□□□□ -0.34
Rb1P13405 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.94□□□□□ -0.34
Rb1P13405 Mettl6-204ENSMUST00000227595 1027 ntBASIC12.94□□□□□ -0.34
Rb1P13405 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rb1P13405 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Rb1P13405 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC12.94□□□□□ -0.34
Rb1P13405 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rb1P13405 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rb1P13405 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rb1P13405 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Rb1P13405 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.94□□□□□ -0.34
Rb1P13405 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rb1P13405 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rb1P13405 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rb1P13405 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rb1P13405 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rb1P13405 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rb1P13405 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rb1P13405 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rb1P13405 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rb1P13405 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rb1P13405 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rb1P13405 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rb1P13405 AC123738.2-201ENSMUST00000223791 1899 ntBASIC12.93□□□□□ -0.34
Rb1P13405 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rb1P13405 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rb1P13405 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Rb1P13405 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rb1P13405 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Rb1P13405 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rb1P13405 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rb1P13405 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rb1P13405 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rb1P13405 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rb1P13405 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rb1P13405 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rb1P13405 Gm26185-201ENSMUST00000157692 266 ntBASIC12.93□□□□□ -0.34
Rb1P13405 Mir5132-201ENSMUST00000175166 71 ntBASIC12.93□□□□□ -0.34
Rb1P13405 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rb1P13405 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Rb1P13405 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC12.93□□□□□ -0.34
Rb1P13405 Gm5363-201ENSMUST00000211927 938 ntBASIC12.93□□□□□ -0.34
Rb1P13405 Gm6082-201ENSMUST00000215204 454 ntBASIC12.93□□□□□ -0.34
Rb1P13405 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.93□□□□□ -0.34
Rb1P13405 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rb1P13405 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.93□□□□□ -0.34
Rb1P13405 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rb1P13405 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Rb1P13405 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rb1P13405 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rb1P13405 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rb1P13405 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rb1P13405 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rb1P13405 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rb1P13405 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rb1P13405 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rb1P13405 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rb1P13405 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Rb1P13405 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rb1P13405 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Rb1P13405 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rb1P13405 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rb1P13405 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rb1P13405 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC12.93□□□□□ -0.34
Rb1P13405 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rb1P13405 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rb1P13405 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rb1P13405 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rb1P13405 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rb1P13405 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Rb1P13405 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rb1P13405 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rb1P13405 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Rb1P13405 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rb1P13405 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rb1P13405 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rb1P13405 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Rb1P13405 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Rb1P13405 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rb1P13405 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rb1P13405 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rb1P13405 Gm44913-201ENSMUST00000208060 2990 ntBASIC12.92□□□□□ -0.34
Rb1P13405 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rb1P13405 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Rb1P13405 Gm10434-201ENSMUST00000101158 471 ntBASIC12.92□□□□□ -0.34
Rb1P13405 Gm11658-201ENSMUST00000120913 1008 ntBASIC12.92□□□□□ -0.34
Rb1P13405 Gm16479-201ENSMUST00000121706 932 ntBASIC12.92□□□□□ -0.34
Rb1P13405 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rb1P13405 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Rb1P13405 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Rb1P13405 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12.92□□□□□ -0.34
Rb1P13405 Gm2467-201ENSMUST00000182266 1010 ntBASIC12.92□□□□□ -0.34
Rb1P13405 Gm3890-201ENSMUST00000182416 207 ntBASIC12.92□□□□□ -0.34
Rb1P13405 Gm6981-201ENSMUST00000182467 1008 ntBASIC12.92□□□□□ -0.34
Rb1P13405 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Rb1P13405 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC12.92□□□□□ -0.34
Rb1P13405 Morn2-202ENSMUST00000227729 656 ntBASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms