Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Ccl3P10855 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccl3P10855 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccl3P10855 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Ccl3P10855 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccl3P10855 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ccl3P10855 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC11.07□□□□□ -0.64
Ccl3P10855 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Ccl3P10855 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccl3P10855 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Ccl3P10855 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccl3P10855 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccl3P10855 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccl3P10855 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Ccl3P10855 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Ccl3P10855 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
Ccl3P10855 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccl3P10855 Gm6580-201ENSMUST00000117504 1357 ntBASIC11.06□□□□□ -0.64
Ccl3P10855 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC11.06□□□□□ -0.64
Ccl3P10855 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Ccl3P10855 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Ccl3P10855 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccl3P10855 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccl3P10855 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Ccl3P10855 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccl3P10855 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccl3P10855 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccl3P10855 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC11.06□□□□□ -0.64
Ccl3P10855 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Ccl3P10855 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Ccl3P10855 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccl3P10855 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccl3P10855 Mir680-2-201ENSMUST00000102163 110 ntBASIC11.06□□□□□ -0.64
Ccl3P10855 Gm23251-201ENSMUST00000103773 110 ntBASIC11.06□□□□□ -0.64
Ccl3P10855 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.06□□□□□ -0.64
Ccl3P10855 Gm11941-201ENSMUST00000119904 610 ntBASIC11.06□□□□□ -0.64
Ccl3P10855 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC11.06□□□□□ -0.64
Ccl3P10855 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC11.06□□□□□ -0.64
Ccl3P10855 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC11.06□□□□□ -0.64
Ccl3P10855 Gm27438-201ENSMUST00000183480 110 ntBASIC11.06□□□□□ -0.64
Ccl3P10855 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Ccl3P10855 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC11.06□□□□□ -0.64
Ccl3P10855 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC11.06□□□□□ -0.64
Ccl3P10855 Gm270-201ENSMUST00000223010 976 ntBASIC11.06□□□□□ -0.64
Ccl3P10855 Gm1821-202ENSMUST00000227415 750 ntBASIC11.06□□□□□ -0.64
Ccl3P10855 AC133602.1-201ENSMUST00000227510 509 ntBASIC11.06□□□□□ -0.64
Ccl3P10855 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccl3P10855 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccl3P10855 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Ccl3P10855 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Ccl3P10855 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Ccl3P10855 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Ccl3P10855 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccl3P10855 Gm5847-201ENSMUST00000178959 1595 ntBASIC11.06□□□□□ -0.64
Ccl3P10855 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccl3P10855 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Ccl3P10855 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccl3P10855 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
Ccl3P10855 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccl3P10855 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC11.06□□□□□ -0.64
Ccl3P10855 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccl3P10855 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccl3P10855 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Ccl3P10855 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccl3P10855 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccl3P10855 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccl3P10855 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Ccl3P10855 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ccl3P10855 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ccl3P10855 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Ccl3P10855 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ccl3P10855 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Ccl3P10855 Gm8617-201ENSMUST00000118796 2222 ntBASIC11.05□□□□□ -0.64
Ccl3P10855 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC11.05□□□□□ -0.64
Ccl3P10855 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ccl3P10855 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ccl3P10855 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Ccl3P10855 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ccl3P10855 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ccl3P10855 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ccl3P10855 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ccl3P10855 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ccl3P10855 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ccl3P10855 Gm14665-201ENSMUST00000122294 557 ntBASIC11.05□□□□□ -0.64
Ccl3P10855 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Ccl3P10855 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC11.05□□□□□ -0.64
Ccl3P10855 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC11.05□□□□□ -0.64
Ccl3P10855 Gm25881-201ENSMUST00000157783 103 ntBASIC11.05□□□□□ -0.64
Ccl3P10855 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Ccl3P10855 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Ccl3P10855 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ccl3P10855 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Ccl3P10855 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Ccl3P10855 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
Ccl3P10855 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Ccl3P10855 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC11.05□□□□□ -0.64
Ccl3P10855 AC154849.4-201ENSMUST00000224868 365 ntBASIC11.05□□□□□ -0.64
Ccl3P10855 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ccl3P10855 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Ccl3P10855 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms