Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
PtcraP0C6B2 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
PtcraP0C6B2 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC10.95□□□□□ -0.66
PtcraP0C6B2 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
PtcraP0C6B2 AC164702.1-201ENSMUST00000220135 2212 ntBASIC10.95□□□□□ -0.66
PtcraP0C6B2 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
PtcraP0C6B2 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC10.95□□□□□ -0.66
PtcraP0C6B2 Gm5187-201ENSMUST00000117317 991 ntBASIC10.95□□□□□ -0.66
PtcraP0C6B2 Gm12314-201ENSMUST00000118104 538 ntBASIC10.95□□□□□ -0.66
PtcraP0C6B2 Gm13736-201ENSMUST00000119272 253 ntBASIC10.95□□□□□ -0.66
PtcraP0C6B2 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
PtcraP0C6B2 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
PtcraP0C6B2 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
PtcraP0C6B2 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
PtcraP0C6B2 Gm36991-201ENSMUST00000191800 648 ntBASIC10.95□□□□□ -0.66
PtcraP0C6B2 Gm37008-201ENSMUST00000195712 319 ntBASIC10.95□□□□□ -0.66
PtcraP0C6B2 Gm44405-201ENSMUST00000198952 126 ntBASIC10.95□□□□□ -0.66
PtcraP0C6B2 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC10.95□□□□□ -0.66
PtcraP0C6B2 AC153962.4-201ENSMUST00000217878 242 ntBASIC10.95□□□□□ -0.66
PtcraP0C6B2 Gm19309-201ENSMUST00000218295 205 ntBASIC10.95□□□□□ -0.66
PtcraP0C6B2 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
PtcraP0C6B2 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
PtcraP0C6B2 Rnf17-202ENSMUST00000223627 2077 ntBASIC10.95□□□□□ -0.66
PtcraP0C6B2 Gm44942-201ENSMUST00000096093 2072 ntBASIC10.95□□□□□ -0.66
PtcraP0C6B2 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
PtcraP0C6B2 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
PtcraP0C6B2 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
PtcraP0C6B2 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
PtcraP0C6B2 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
PtcraP0C6B2 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC10.95□□□□□ -0.66
PtcraP0C6B2 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
PtcraP0C6B2 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
PtcraP0C6B2 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
PtcraP0C6B2 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
PtcraP0C6B2 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
PtcraP0C6B2 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
PtcraP0C6B2 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
PtcraP0C6B2 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
PtcraP0C6B2 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
PtcraP0C6B2 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
PtcraP0C6B2 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
PtcraP0C6B2 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
PtcraP0C6B2 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
PtcraP0C6B2 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
PtcraP0C6B2 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
PtcraP0C6B2 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
PtcraP0C6B2 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC10.94□□□□□ -0.66
PtcraP0C6B2 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
PtcraP0C6B2 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
PtcraP0C6B2 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
PtcraP0C6B2 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
PtcraP0C6B2 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC10.94□□□□□ -0.66
PtcraP0C6B2 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
PtcraP0C6B2 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC10.94□□□□□ -0.66
PtcraP0C6B2 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
PtcraP0C6B2 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
PtcraP0C6B2 Gm10434-201ENSMUST00000101158 471 ntBASIC10.94□□□□□ -0.66
PtcraP0C6B2 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
PtcraP0C6B2 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC10.94□□□□□ -0.66
PtcraP0C6B2 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC10.94□□□□□ -0.66
PtcraP0C6B2 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC10.94□□□□□ -0.66
PtcraP0C6B2 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC10.94□□□□□ -0.66
PtcraP0C6B2 AC140451.2-201ENSMUST00000228030 664 ntBASIC10.94□□□□□ -0.66
PtcraP0C6B2 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
PtcraP0C6B2 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
PtcraP0C6B2 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
PtcraP0C6B2 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
PtcraP0C6B2 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
PtcraP0C6B2 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
PtcraP0C6B2 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC10.94□□□□□ -0.66
PtcraP0C6B2 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
PtcraP0C6B2 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC10.94□□□□□ -0.66
PtcraP0C6B2 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC10.94□□□□□ -0.66
PtcraP0C6B2 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
PtcraP0C6B2 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
PtcraP0C6B2 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
PtcraP0C6B2 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
PtcraP0C6B2 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
PtcraP0C6B2 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC10.94□□□□□ -0.66
PtcraP0C6B2 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
PtcraP0C6B2 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
PtcraP0C6B2 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
PtcraP0C6B2 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
PtcraP0C6B2 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
PtcraP0C6B2 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
PtcraP0C6B2 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
PtcraP0C6B2 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
PtcraP0C6B2 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
PtcraP0C6B2 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
PtcraP0C6B2 Gm5780-201ENSMUST00000217774 1834 ntBASIC10.93□□□□□ -0.66
PtcraP0C6B2 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
PtcraP0C6B2 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
PtcraP0C6B2 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
PtcraP0C6B2 Gm7114-201ENSMUST00000190159 1789 ntBASIC10.93□□□□□ -0.66
PtcraP0C6B2 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC10.93□□□□□ -0.66
PtcraP0C6B2 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
PtcraP0C6B2 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
PtcraP0C6B2 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
PtcraP0C6B2 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
PtcraP0C6B2 Gm22018-201ENSMUST00000104357 131 ntBASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms