Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp6P0C0A3 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp6P0C0A3 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp6P0C0A3 Gm23931-201ENSMUST00000103842 109 ntBASIC13.7□□□□□ -0.22
Chmp6P0C0A3 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC13.7□□□□□ -0.22
Chmp6P0C0A3 Gm13392-201ENSMUST00000117708 150 ntBASIC13.7□□□□□ -0.22
Chmp6P0C0A3 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp6P0C0A3 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC13.7□□□□□ -0.22
Chmp6P0C0A3 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC13.7□□□□□ -0.22
Chmp6P0C0A3 Gm25261-201ENSMUST00000157416 134 ntBASIC13.7□□□□□ -0.22
Chmp6P0C0A3 Gm22121-201ENSMUST00000175148 54 ntBASIC13.7□□□□□ -0.22
Chmp6P0C0A3 Gm18916-201ENSMUST00000198264 1246 ntBASIC13.7□□□□□ -0.22
Chmp6P0C0A3 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp6P0C0A3 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC13.7□□□□□ -0.22
Chmp6P0C0A3 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC13.7□□□□□ -0.22
Chmp6P0C0A3 AC069562.3-201ENSMUST00000225387 587 ntBASIC13.7□□□□□ -0.22
Chmp6P0C0A3 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Chmp6P0C0A3 Snora73a-201ENSMUST00000082453 205 ntBASIC13.7□□□□□ -0.22
Chmp6P0C0A3 Gm10478-201ENSMUST00000084451 396 ntBASIC13.7□□□□□ -0.22
Chmp6P0C0A3 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Chmp6P0C0A3 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Chmp6P0C0A3 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp6P0C0A3 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp6P0C0A3 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC13.7□□□□□ -0.22
Chmp6P0C0A3 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Chmp6P0C0A3 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
Chmp6P0C0A3 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp6P0C0A3 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp6P0C0A3 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp6P0C0A3 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC13.7□□□□□ -0.22
Chmp6P0C0A3 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp6P0C0A3 Cog3-203ENSMUST00000227473 4197 ntBASIC13.7□□□□□ -0.22
Chmp6P0C0A3 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
Chmp6P0C0A3 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp6P0C0A3 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp6P0C0A3 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp6P0C0A3 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp6P0C0A3 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp6P0C0A3 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp6P0C0A3 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp6P0C0A3 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp6P0C0A3 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp6P0C0A3 Gm8793-201ENSMUST00000183069 1303 ntBASIC13.69□□□□□ -0.22
Chmp6P0C0A3 Gm44775-201ENSMUST00000207266 1456 ntBASIC13.69□□□□□ -0.22
Chmp6P0C0A3 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp6P0C0A3 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp6P0C0A3 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Chmp6P0C0A3 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp6P0C0A3 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Chmp6P0C0A3 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Chmp6P0C0A3 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Chmp6P0C0A3 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp6P0C0A3 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp6P0C0A3 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp6P0C0A3 Gm11591-201ENSMUST00000120063 702 ntBASIC13.69□□□□□ -0.22
Chmp6P0C0A3 Gm12502-201ENSMUST00000120197 444 ntBASIC13.69□□□□□ -0.22
Chmp6P0C0A3 Gm16379-201ENSMUST00000161469 348 ntBASIC13.69□□□□□ -0.22
Chmp6P0C0A3 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp6P0C0A3 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC13.69□□□□□ -0.22
Chmp6P0C0A3 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC13.69□□□□□ -0.22
Chmp6P0C0A3 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Chmp6P0C0A3 Gm8762-201ENSMUST00000193486 339 ntBASIC13.69□□□□□ -0.22
Chmp6P0C0A3 Gm43438-201ENSMUST00000198133 379 ntBASIC13.69□□□□□ -0.22
Chmp6P0C0A3 Gm8099-201ENSMUST00000200510 742 ntBASIC13.69□□□□□ -0.22
Chmp6P0C0A3 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp6P0C0A3 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp6P0C0A3 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp6P0C0A3 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp6P0C0A3 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Chmp6P0C0A3 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Chmp6P0C0A3 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Chmp6P0C0A3 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp6P0C0A3 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
Chmp6P0C0A3 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp6P0C0A3 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp6P0C0A3 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp6P0C0A3 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp6P0C0A3 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp6P0C0A3 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp6P0C0A3 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp6P0C0A3 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp6P0C0A3 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp6P0C0A3 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Chmp6P0C0A3 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
Chmp6P0C0A3 Gm37105-201ENSMUST00000192251 2085 ntBASIC13.68□□□□□ -0.22
Chmp6P0C0A3 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp6P0C0A3 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp6P0C0A3 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp6P0C0A3 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC13.68□□□□□ -0.22
Chmp6P0C0A3 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC13.68□□□□□ -0.22
Chmp6P0C0A3 Gm7809-201ENSMUST00000153199 742 ntBASIC13.68□□□□□ -0.22
Chmp6P0C0A3 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC13.68□□□□□ -0.22
Chmp6P0C0A3 Gm43630-201ENSMUST00000201550 776 ntBASIC13.68□□□□□ -0.22
Chmp6P0C0A3 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp6P0C0A3 Gm9823-201ENSMUST00000051212 327 ntBASIC13.68□□□□□ -0.22
Chmp6P0C0A3 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC13.68□□□□□ -0.22
Chmp6P0C0A3 n-R5s195-201ENSMUST00000082891 119 ntBASIC13.68□□□□□ -0.22
Chmp6P0C0A3 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp6P0C0A3 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp6P0C0A3 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 87.7 ms