Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
P06344 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
P06344 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
P06344 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
P06344 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
P06344 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
P06344 Gm13875-201ENSMUST00000120162 282 ntBASIC11.21□□□□□ -0.61
P06344 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC11.21□□□□□ -0.61
P06344 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC11.21□□□□□ -0.61
P06344 Gm8176-201ENSMUST00000191297 1099 ntBASIC11.21□□□□□ -0.61
P06344 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
P06344 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.21□□□□□ -0.61
P06344 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.21□□□□□ -0.61
P06344 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC11.21□□□□□ -0.61
P06344 Gm45925-201ENSMUST00000218882 744 ntBASIC11.21□□□□□ -0.61
P06344 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
P06344 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
P06344 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC11.21□□□□□ -0.61
P06344 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
P06344 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
P06344 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
P06344 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
P06344 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
P06344 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
P06344 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
P06344 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
P06344 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
P06344 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
P06344 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
P06344 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
P06344 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
P06344 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
P06344 Gm13722-201ENSMUST00000117964 3066 ntBASIC11.2□□□□□ -0.62
P06344 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
P06344 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
P06344 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
P06344 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
P06344 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
P06344 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC11.2□□□□□ -0.62
P06344 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
P06344 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
P06344 Gm4366-201ENSMUST00000201488 1342 ntBASIC11.2□□□□□ -0.62
P06344 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
P06344 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
P06344 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
P06344 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
P06344 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC11.2□□□□□ -0.62
P06344 Gm11222-201ENSMUST00000119005 738 ntBASIC11.2□□□□□ -0.62
P06344 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
P06344 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
P06344 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC11.2□□□□□ -0.62
P06344 Gm8018-201ENSMUST00000173536 789 ntBASIC11.2□□□□□ -0.62
P06344 Gm2546-201ENSMUST00000182630 991 ntBASIC11.2□□□□□ -0.62
P06344 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC11.2□□□□□ -0.62
P06344 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
P06344 Gm19963-201ENSMUST00000208413 1255 ntBASIC11.2□□□□□ -0.62
P06344 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC11.2□□□□□ -0.62
P06344 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC11.2□□□□□ -0.62
P06344 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC11.2□□□□□ -0.62
P06344 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.2□□□□□ -0.62
P06344 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
P06344 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
P06344 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
P06344 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
P06344 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC11.2□□□□□ -0.62
P06344 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
P06344 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC11.2□□□□□ -0.62
P06344 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
P06344 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
P06344 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.2□□□□□ -0.62
P06344 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
P06344 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
P06344 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC11.2□□□□□ -0.62
P06344 Zkscan3-207ENSMUST00000223831 2101 ntBASIC11.2□□□□□ -0.62
P06344 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
P06344 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
P06344 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
P06344 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
P06344 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC11.19□□□□□ -0.62
P06344 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
P06344 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P06344 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P06344 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
P06344 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
P06344 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
P06344 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P06344 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P06344 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC11.19□□□□□ -0.62
P06344 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
P06344 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
P06344 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P06344 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P06344 Gm13736-201ENSMUST00000119272 253 ntBASIC11.19□□□□□ -0.62
P06344 Gm14381-201ENSMUST00000122105 414 ntBASIC11.19□□□□□ -0.62
P06344 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
P06344 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC11.19□□□□□ -0.62
P06344 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P06344 Gm5597-201ENSMUST00000182353 1193 ntBASIC11.19□□□□□ -0.62
P06344 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC11.19□□□□□ -0.62
P06344 Gm37259-201ENSMUST00000193903 849 ntBASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms