Protein–RNA interactions for Protein: P06323

T-cell receptor alpha chain V region CTL-F3, mousemouse

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06323 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
P06323 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
P06323 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
P06323 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
P06323 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
P06323 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
P06323 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
P06323 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
P06323 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
P06323 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
P06323 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
P06323 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P06323 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P06323 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P06323 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P06323 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
P06323 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
P06323 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
P06323 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC10.17□□□□□ -0.78
P06323 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P06323 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
P06323 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
P06323 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
P06323 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P06323 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P06323 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P06323 Gm43075-201ENSMUST00000198613 3905 ntBASIC10.17□□□□□ -0.78
P06323 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P06323 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC10.17□□□□□ -0.78
P06323 Gm13612-201ENSMUST00000119276 390 ntBASIC10.17□□□□□ -0.78
P06323 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
P06323 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
P06323 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC10.17□□□□□ -0.78
P06323 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P06323 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC10.17□□□□□ -0.78
P06323 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
P06323 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC10.17□□□□□ -0.78
P06323 Gm8515-201ENSMUST00000194852 576 ntBASIC10.17□□□□□ -0.78
P06323 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC10.17□□□□□ -0.78
P06323 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
P06323 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC10.17□□□□□ -0.78
P06323 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC10.17□□□□□ -0.78
P06323 AC150560.1-201ENSMUST00000227731 1187 ntBASIC10.17□□□□□ -0.78
P06323 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P06323 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P06323 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
P06323 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P06323 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
P06323 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
P06323 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P06323 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
P06323 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
P06323 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P06323 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC10.17□□□□□ -0.78
P06323 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P06323 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC10.17□□□□□ -0.78
P06323 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P06323 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
P06323 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P06323 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P06323 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
P06323 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
P06323 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
P06323 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P06323 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
P06323 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC10.17□□□□□ -0.78
P06323 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC10.17□□□□□ -0.78
P06323 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P06323 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
P06323 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
P06323 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
P06323 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC10.16□□□□□ -0.78
P06323 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC10.16□□□□□ -0.78
P06323 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC10.16□□□□□ -0.78
P06323 Gm26684-202ENSMUST00000228229 8257 ntBASIC10.16□□□□□ -0.78
P06323 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
P06323 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC10.16□□□□□ -0.78
P06323 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
P06323 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
P06323 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
P06323 Gm44806-201ENSMUST00000205574 2303 ntBASIC10.16□□□□□ -0.78
P06323 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
P06323 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
P06323 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
P06323 Daam2-202ENSMUST00000224595 1926 ntBASIC10.16□□□□□ -0.78
P06323 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
P06323 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.16□□□□□ -0.78
P06323 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
P06323 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
P06323 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC10.16□□□□□ -0.78
P06323 Gm9124-201ENSMUST00000191789 1092 ntBASIC10.16□□□□□ -0.78
P06323 Gm9113-201ENSMUST00000192510 1018 ntBASIC10.16□□□□□ -0.78
P06323 Gm9131-201ENSMUST00000193557 1089 ntBASIC10.16□□□□□ -0.78
P06323 Gm9121-201ENSMUST00000193749 1071 ntBASIC10.16□□□□□ -0.78
P06323 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC10.16□□□□□ -0.78
P06323 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC10.16□□□□□ -0.78
P06323 AC134254.1-201ENSMUST00000221362 167 ntBASIC10.16□□□□□ -0.78
P06323 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC10.16□□□□□ -0.78
P06323 AC159006.1-201ENSMUST00000226396 258 ntBASIC10.16□□□□□ -0.78
P06323 CT025535.1-201ENSMUST00000227172 491 ntBASIC10.16□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms