Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CfdP03953 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CfdP03953 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC10.49□□□□□ -0.73
CfdP03953 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
CfdP03953 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
CfdP03953 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
CfdP03953 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CfdP03953 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CfdP03953 Gm45776-201ENSMUST00000212366 1522 ntBASIC10.48□□□□□ -0.73
CfdP03953 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC10.48□□□□□ -0.73
CfdP03953 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CfdP03953 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CfdP03953 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CfdP03953 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
CfdP03953 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CfdP03953 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
CfdP03953 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
CfdP03953 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CfdP03953 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC10.48□□□□□ -0.73
CfdP03953 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CfdP03953 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
CfdP03953 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
CfdP03953 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC10.48□□□□□ -0.73
CfdP03953 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC10.48□□□□□ -0.73
CfdP03953 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
CfdP03953 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
CfdP03953 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
CfdP03953 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
CfdP03953 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC10.48□□□□□ -0.73
CfdP03953 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC10.48□□□□□ -0.73
CfdP03953 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CfdP03953 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CfdP03953 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CfdP03953 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
CfdP03953 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CfdP03953 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
CfdP03953 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CfdP03953 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC10.48□□□□□ -0.73
CfdP03953 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
CfdP03953 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CfdP03953 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
CfdP03953 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
CfdP03953 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
CfdP03953 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
CfdP03953 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
CfdP03953 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
CfdP03953 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
CfdP03953 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
CfdP03953 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC10.48□□□□□ -0.73
CfdP03953 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
CfdP03953 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CfdP03953 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CfdP03953 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CfdP03953 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
CfdP03953 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
CfdP03953 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
CfdP03953 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CfdP03953 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
CfdP03953 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
CfdP03953 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CfdP03953 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CfdP03953 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
CfdP03953 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CfdP03953 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
CfdP03953 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CfdP03953 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CfdP03953 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
CfdP03953 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CfdP03953 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC10.47□□□□□ -0.73
CfdP03953 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC10.47□□□□□ -0.73
CfdP03953 Gm12416-201ENSMUST00000120911 1008 ntBASIC10.47□□□□□ -0.73
CfdP03953 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC10.47□□□□□ -0.73
CfdP03953 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC10.47□□□□□ -0.73
CfdP03953 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CfdP03953 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
CfdP03953 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CfdP03953 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
CfdP03953 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC10.47□□□□□ -0.73
CfdP03953 Gm22175-201ENSMUST00000175007 78 ntBASIC10.47□□□□□ -0.73
CfdP03953 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC10.47□□□□□ -0.73
CfdP03953 CT943659.1-201ENSMUST00000215459 326 ntBASIC10.47□□□□□ -0.73
CfdP03953 AC155258.1-201ENSMUST00000219303 253 ntBASIC10.47□□□□□ -0.73
CfdP03953 AC124732.2-201ENSMUST00000221977 316 ntBASIC10.47□□□□□ -0.73
CfdP03953 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CfdP03953 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
CfdP03953 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
CfdP03953 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
CfdP03953 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
CfdP03953 Fgf17-202ENSMUST00000227123 1336 ntBASIC10.47□□□□□ -0.73
CfdP03953 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CfdP03953 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC10.47□□□□□ -0.73
CfdP03953 Retreg1-206ENSMUST00000228306 1430 ntBASIC10.47□□□□□ -0.73
CfdP03953 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
CfdP03953 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
CfdP03953 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CfdP03953 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CfdP03953 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC10.47□□□□□ -0.73
CfdP03953 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CfdP03953 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CfdP03953 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms