Protein–RNA interactions for Protein: P02340

Tp53, Cellular tumor antigen p53, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tp53P02340 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC13.58□□□□□ -0.24
Tp53P02340 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC13.58□□□□□ -0.24
Tp53P02340 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Tp53P02340 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Tp53P02340 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
Tp53P02340 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Tp53P02340 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tp53P02340 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Tp53P02340 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tp53P02340 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Tp53P02340 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tp53P02340 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tp53P02340 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Tp53P02340 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Tp53P02340 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tp53P02340 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tp53P02340 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Tp53P02340 CT009757.3-201ENSMUST00000223367 2320 ntBASIC13.57□□□□□ -0.24
Tp53P02340 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Tp53P02340 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tp53P02340 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC13.57□□□□□ -0.24
Tp53P02340 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC13.57□□□□□ -0.24
Tp53P02340 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tp53P02340 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tp53P02340 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tp53P02340 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Tp53P02340 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tp53P02340 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC13.57□□□□□ -0.24
Tp53P02340 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Tp53P02340 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC13.57□□□□□ -0.24
Tp53P02340 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Tp53P02340 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Tp53P02340 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Tp53P02340 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Tp53P02340 Gm45880-201ENSMUST00000213041 853 ntBASIC13.57□□□□□ -0.24
Tp53P02340 Gm39404-201ENSMUST00000216350 313 ntBASIC13.57□□□□□ -0.24
Tp53P02340 CU024892.2-201ENSMUST00000224608 832 ntBASIC13.57□□□□□ -0.24
Tp53P02340 AC125209.1-201ENSMUST00000225812 766 ntBASIC13.57□□□□□ -0.24
Tp53P02340 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tp53P02340 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Tp53P02340 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Tp53P02340 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Tp53P02340 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tp53P02340 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC13.57□□□□□ -0.24
Tp53P02340 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tp53P02340 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tp53P02340 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Tp53P02340 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tp53P02340 AC122840.1-201ENSMUST00000220915 3334 ntBASIC13.57□□□□□ -0.24
Tp53P02340 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tp53P02340 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tp53P02340 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tp53P02340 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tp53P02340 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC13.56□□□□□ -0.24
Tp53P02340 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tp53P02340 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tp53P02340 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tp53P02340 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.56□□□□□ -0.24
Tp53P02340 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Tp53P02340 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
Tp53P02340 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.56□□□□□ -0.24
Tp53P02340 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Tp53P02340 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Tp53P02340 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Tp53P02340 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Tp53P02340 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tp53P02340 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC13.56□□□□□ -0.24
Tp53P02340 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Tp53P02340 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Tp53P02340 Gm11793-201ENSMUST00000120433 981 ntBASIC13.56□□□□□ -0.24
Tp53P02340 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Tp53P02340 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC13.56□□□□□ -0.24
Tp53P02340 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tp53P02340 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC13.56□□□□□ -0.24
Tp53P02340 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Tp53P02340 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Tp53P02340 Gm5904-201ENSMUST00000210286 865 ntBASIC13.56□□□□□ -0.24
Tp53P02340 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC13.56□□□□□ -0.24
Tp53P02340 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC13.56□□□□□ -0.24
Tp53P02340 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC13.56□□□□□ -0.24
Tp53P02340 Gm7172-201ENSMUST00000218047 1152 ntBASIC13.56□□□□□ -0.24
Tp53P02340 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
Tp53P02340 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Tp53P02340 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tp53P02340 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tp53P02340 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tp53P02340 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC13.56□□□□□ -0.24
Tp53P02340 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tp53P02340 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tp53P02340 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tp53P02340 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Tp53P02340 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tp53P02340 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Tp53P02340 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tp53P02340 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tp53P02340 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tp53P02340 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tp53P02340 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Tp53P02340 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tp53P02340 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms