Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.23
Vti1aO89116 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Vti1aO89116 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Vti1aO89116 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.23
Vti1aO89116 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Vti1aO89116 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Vti1aO89116 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Vti1aO89116 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vti1aO89116 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Vti1aO89116 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vti1aO89116 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vti1aO89116 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Vti1aO89116 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vti1aO89116 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Vti1aO89116 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC13.58□□□□□ -0.24
Vti1aO89116 Gm11531-201ENSMUST00000117614 555 ntBASIC13.58□□□□□ -0.24
Vti1aO89116 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC13.58□□□□□ -0.24
Vti1aO89116 Gm15276-201ENSMUST00000145953 498 ntBASIC13.58□□□□□ -0.24
Vti1aO89116 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Vti1aO89116 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Vti1aO89116 Gm24990-201ENSMUST00000157406 323 ntBASIC13.58□□□□□ -0.24
Vti1aO89116 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Vti1aO89116 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Vti1aO89116 Gm9061-201ENSMUST00000182707 1006 ntBASIC13.58□□□□□ -0.24
Vti1aO89116 Ighv8-10-201ENSMUST00000199579 358 ntBASIC13.58□□□□□ -0.24
Vti1aO89116 Gm8099-201ENSMUST00000200510 742 ntBASIC13.58□□□□□ -0.24
Vti1aO89116 AC154305.4-201ENSMUST00000224520 614 ntBASIC13.58□□□□□ -0.24
Vti1aO89116 AC093022.5-201ENSMUST00000226841 1079 ntBASIC13.58□□□□□ -0.24
Vti1aO89116 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vti1aO89116 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vti1aO89116 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vti1aO89116 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vti1aO89116 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC13.58□□□□□ -0.24
Vti1aO89116 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Vti1aO89116 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vti1aO89116 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Vti1aO89116 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vti1aO89116 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vti1aO89116 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC13.58□□□□□ -0.24
Vti1aO89116 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Vti1aO89116 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.58□□□□□ -0.24
Vti1aO89116 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Vti1aO89116 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vti1aO89116 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vti1aO89116 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vti1aO89116 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vti1aO89116 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Vti1aO89116 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC13.57□□□□□ -0.24
Vti1aO89116 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vti1aO89116 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vti1aO89116 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vti1aO89116 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vti1aO89116 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Vti1aO89116 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vti1aO89116 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vti1aO89116 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC13.57□□□□□ -0.24
Vti1aO89116 Gm8228-201ENSMUST00000189949 2192 ntBASIC13.57□□□□□ -0.24
Vti1aO89116 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Vti1aO89116 Gm2606-201ENSMUST00000100754 1002 ntBASIC13.57□□□□□ -0.24
Vti1aO89116 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vti1aO89116 Snord83b-201ENSMUST00000104546 94 ntBASIC13.57□□□□□ -0.24
Vti1aO89116 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vti1aO89116 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Vti1aO89116 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Vti1aO89116 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vti1aO89116 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vti1aO89116 Gm23363-201ENSMUST00000175024 79 ntBASIC13.57□□□□□ -0.24
Vti1aO89116 Gm5597-201ENSMUST00000182353 1193 ntBASIC13.57□□□□□ -0.24
Vti1aO89116 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Vti1aO89116 Gm5869-201ENSMUST00000200248 1257 ntBASIC13.57□□□□□ -0.24
Vti1aO89116 Gm5950-201ENSMUST00000213337 772 ntBASIC13.57□□□□□ -0.24
Vti1aO89116 Gm7293-201ENSMUST00000216682 1007 ntBASIC13.57□□□□□ -0.24
Vti1aO89116 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vti1aO89116 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vti1aO89116 Gm22058-201ENSMUST00000083393 310 ntBASIC13.57□□□□□ -0.24
Vti1aO89116 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vti1aO89116 Gm40377-201ENSMUST00000204604 2015 ntBASIC13.57□□□□□ -0.24
Vti1aO89116 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vti1aO89116 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Vti1aO89116 Gm4366-201ENSMUST00000201488 1342 ntBASIC13.57□□□□□ -0.24
Vti1aO89116 Gm9333-201ENSMUST00000205452 1323 ntBASIC13.57□□□□□ -0.24
Vti1aO89116 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vti1aO89116 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vti1aO89116 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vti1aO89116 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC13.57□□□□□ -0.24
Vti1aO89116 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vti1aO89116 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Vti1aO89116 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Vti1aO89116 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vti1aO89116 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vti1aO89116 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Vti1aO89116 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vti1aO89116 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vti1aO89116 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Vti1aO89116 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Vti1aO89116 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vti1aO89116 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Vti1aO89116 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vti1aO89116 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Vti1aO89116 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms