Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Matn3O35701 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Matn3O35701 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Matn3O35701 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Matn3O35701 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Matn3O35701 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Matn3O35701 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Matn3O35701 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Matn3O35701 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Matn3O35701 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Matn3O35701 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Matn3O35701 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Matn3O35701 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Matn3O35701 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Matn3O35701 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Matn3O35701 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Matn3O35701 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Matn3O35701 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Matn3O35701 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Matn3O35701 Mir686-201ENSMUST00000102174 109 ntBASIC11.42□□□□□ -0.58
Matn3O35701 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Matn3O35701 Gm14719-201ENSMUST00000121891 340 ntBASIC11.42□□□□□ -0.58
Matn3O35701 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC11.42□□□□□ -0.58
Matn3O35701 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Matn3O35701 H2-Pa-201ENSMUST00000182803 626 ntBASIC11.42□□□□□ -0.58
Matn3O35701 Gm27838-201ENSMUST00000184829 128 ntBASIC11.42□□□□□ -0.58
Matn3O35701 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Matn3O35701 Gm44985-201ENSMUST00000206202 1016 ntBASIC11.42□□□□□ -0.58
Matn3O35701 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Matn3O35701 Gm2423-201ENSMUST00000074863 733 ntBASIC11.42□□□□□ -0.58
Matn3O35701 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Matn3O35701 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Matn3O35701 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Matn3O35701 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC11.42□□□□□ -0.58
Matn3O35701 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Matn3O35701 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Matn3O35701 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Matn3O35701 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Matn3O35701 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Matn3O35701 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Matn3O35701 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Matn3O35701 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Matn3O35701 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Matn3O35701 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Matn3O35701 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Matn3O35701 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Matn3O35701 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC11.42□□□□□ -0.58
Matn3O35701 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Matn3O35701 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Matn3O35701 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Matn3O35701 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Matn3O35701 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Matn3O35701 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Matn3O35701 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Matn3O35701 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC11.42□□□□□ -0.58
Matn3O35701 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Matn3O35701 Gm21038-201ENSMUST00000222205 1383 ntBASIC11.41□□□□□ -0.58
Matn3O35701 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Matn3O35701 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Matn3O35701 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Matn3O35701 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Matn3O35701 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Matn3O35701 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Matn3O35701 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Matn3O35701 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Matn3O35701 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Matn3O35701 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Matn3O35701 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Matn3O35701 Gm7488-201ENSMUST00000117148 684 ntBASIC11.41□□□□□ -0.58
Matn3O35701 Gm11424-201ENSMUST00000121929 829 ntBASIC11.41□□□□□ -0.58
Matn3O35701 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Matn3O35701 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Matn3O35701 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Matn3O35701 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Matn3O35701 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Matn3O35701 Gm7775-201ENSMUST00000218871 853 ntBASIC11.41□□□□□ -0.58
Matn3O35701 AC132863.2-201ENSMUST00000226643 799 ntBASIC11.41□□□□□ -0.58
Matn3O35701 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Matn3O35701 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Matn3O35701 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Matn3O35701 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Matn3O35701 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Matn3O35701 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Matn3O35701 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Matn3O35701 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Matn3O35701 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Matn3O35701 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Matn3O35701 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Matn3O35701 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Matn3O35701 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Matn3O35701 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Matn3O35701 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Matn3O35701 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Matn3O35701 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Matn3O35701 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Matn3O35701 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Matn3O35701 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Matn3O35701 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Matn3O35701 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Matn3O35701 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms