Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Slc1a6O35544 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Slc1a6O35544 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Slc1a6O35544 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Slc1a6O35544 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Slc1a6O35544 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.36□□□□□ -0.43
Slc1a6O35544 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Slc1a6O35544 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Slc1a6O35544 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Slc1a6O35544 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Slc1a6O35544 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Slc1a6O35544 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Slc1a6O35544 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Slc1a6O35544 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Slc1a6O35544 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Slc1a6O35544 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Slc1a6O35544 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Slc1a6O35544 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Slc1a6O35544 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Slc1a6O35544 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Slc1a6O35544 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Slc1a6O35544 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.35□□□□□ -0.43
Slc1a6O35544 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Slc1a6O35544 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.35□□□□□ -0.43
Slc1a6O35544 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Slc1a6O35544 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Slc1a6O35544 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Slc1a6O35544 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Slc1a6O35544 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Slc1a6O35544 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Slc1a6O35544 Gm24231-201ENSMUST00000104315 133 ntBASIC12.35□□□□□ -0.43
Slc1a6O35544 Gm8805-201ENSMUST00000117848 313 ntBASIC12.35□□□□□ -0.43
Slc1a6O35544 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Slc1a6O35544 Gm16296-201ENSMUST00000159905 325 ntBASIC12.35□□□□□ -0.43
Slc1a6O35544 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC12.35□□□□□ -0.43
Slc1a6O35544 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.35□□□□□ -0.43
Slc1a6O35544 AC238811.3-201ENSMUST00000225422 709 ntBASIC12.35□□□□□ -0.43
Slc1a6O35544 AC125117.1-201ENSMUST00000228121 468 ntBASIC12.35□□□□□ -0.43
Slc1a6O35544 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Slc1a6O35544 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC12.35□□□□□ -0.43
Slc1a6O35544 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC12.35□□□□□ -0.43
Slc1a6O35544 AC160410.1-201ENSMUST00000219298 1972 ntBASIC12.35□□□□□ -0.43
Slc1a6O35544 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Slc1a6O35544 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.35□□□□□ -0.43
Slc1a6O35544 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Slc1a6O35544 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Slc1a6O35544 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Slc1a6O35544 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.35□□□□□ -0.43
Slc1a6O35544 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Slc1a6O35544 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Slc1a6O35544 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Slc1a6O35544 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Slc1a6O35544 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Slc1a6O35544 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Slc1a6O35544 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.35□□□□□ -0.43
Slc1a6O35544 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Slc1a6O35544 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Slc1a6O35544 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Slc1a6O35544 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Slc1a6O35544 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Slc1a6O35544 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
Slc1a6O35544 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Slc1a6O35544 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Slc1a6O35544 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Slc1a6O35544 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Slc1a6O35544 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.34□□□□□ -0.43
Slc1a6O35544 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Slc1a6O35544 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Slc1a6O35544 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Slc1a6O35544 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Slc1a6O35544 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Slc1a6O35544 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.34□□□□□ -0.43
Slc1a6O35544 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Slc1a6O35544 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Slc1a6O35544 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Slc1a6O35544 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.34□□□□□ -0.43
Slc1a6O35544 Gm13123-201ENSMUST00000122173 492 ntBASIC12.34□□□□□ -0.43
Slc1a6O35544 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC12.34□□□□□ -0.43
Slc1a6O35544 Gm16215-201ENSMUST00000161990 637 ntBASIC12.34□□□□□ -0.43
Slc1a6O35544 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Slc1a6O35544 Gm2495-201ENSMUST00000191160 466 ntBASIC12.34□□□□□ -0.43
Slc1a6O35544 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC12.34□□□□□ -0.43
Slc1a6O35544 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.34□□□□□ -0.43
Slc1a6O35544 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.34□□□□□ -0.43
Slc1a6O35544 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Slc1a6O35544 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Slc1a6O35544 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Slc1a6O35544 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Slc1a6O35544 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Slc1a6O35544 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Slc1a6O35544 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.34□□□□□ -0.43
Slc1a6O35544 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Slc1a6O35544 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Slc1a6O35544 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Slc1a6O35544 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Slc1a6O35544 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Slc1a6O35544 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
Slc1a6O35544 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Slc1a6O35544 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Slc1a6O35544 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.33□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms