Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Polr1aO35134 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Polr1aO35134 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Polr1aO35134 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Polr1aO35134 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Polr1aO35134 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Polr1aO35134 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Polr1aO35134 Gm42863-201ENSMUST00000197875 2958 ntBASIC18.96■□□□□ 0.63
Polr1aO35134 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Polr1aO35134 Gm7537-201ENSMUST00000221660 1414 ntBASIC18.95■□□□□ 0.62
Polr1aO35134 AC160405.1-201ENSMUST00000218207 1545 ntBASIC18.95■□□□□ 0.62
Polr1aO35134 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Polr1aO35134 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Polr1aO35134 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Polr1aO35134 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Polr1aO35134 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC18.95■□□□□ 0.62
Polr1aO35134 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Polr1aO35134 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Polr1aO35134 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Polr1aO35134 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Polr1aO35134 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC18.95■□□□□ 0.62
Polr1aO35134 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Polr1aO35134 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC18.95■□□□□ 0.62
Polr1aO35134 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Polr1aO35134 Gm44421-201ENSMUST00000205064 1221 ntBASIC18.95■□□□□ 0.62
Polr1aO35134 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC18.95■□□□□ 0.62
Polr1aO35134 AC165260.2-203ENSMUST00000224237 336 ntBASIC18.95■□□□□ 0.62
Polr1aO35134 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Polr1aO35134 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Polr1aO35134 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Polr1aO35134 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Polr1aO35134 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Polr1aO35134 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Polr1aO35134 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Polr1aO35134 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Polr1aO35134 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Polr1aO35134 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Polr1aO35134 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Polr1aO35134 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Polr1aO35134 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Polr1aO35134 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Polr1aO35134 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Polr1aO35134 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Polr1aO35134 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Polr1aO35134 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Polr1aO35134 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Polr1aO35134 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC18.94■□□□□ 0.62
Polr1aO35134 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Polr1aO35134 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC18.94■□□□□ 0.62
Polr1aO35134 AC122350.1-201ENSMUST00000228135 533 ntBASIC18.94■□□□□ 0.62
Polr1aO35134 Mirlet7i-201ENSMUST00000083472 85 ntBASIC18.94■□□□□ 0.62
Polr1aO35134 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Polr1aO35134 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Polr1aO35134 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Polr1aO35134 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
Polr1aO35134 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Polr1aO35134 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Polr1aO35134 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Polr1aO35134 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Polr1aO35134 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Polr1aO35134 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Polr1aO35134 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Polr1aO35134 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Polr1aO35134 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Polr1aO35134 Gm6903-201ENSMUST00000160509 1366 ntBASIC18.94■□□□□ 0.62
Polr1aO35134 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC18.94■□□□□ 0.62
Polr1aO35134 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Polr1aO35134 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC18.94■□□□□ 0.62
Polr1aO35134 Gm23153-201ENSMUST00000175323 313 ntBASIC18.94■□□□□ 0.62
Polr1aO35134 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Polr1aO35134 Gm6430-201ENSMUST00000054664 1248 ntBASIC18.94■□□□□ 0.62
Polr1aO35134 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Polr1aO35134 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Polr1aO35134 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Polr1aO35134 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Polr1aO35134 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Polr1aO35134 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
Polr1aO35134 CT009489.1-201ENSMUST00000227740 1893 ntBASIC18.93■□□□□ 0.62
Polr1aO35134 Gm13384-201ENSMUST00000117166 1344 ntBASIC18.93■□□□□ 0.62
Polr1aO35134 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Polr1aO35134 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Polr1aO35134 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Polr1aO35134 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Polr1aO35134 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Polr1aO35134 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Polr1aO35134 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Polr1aO35134 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Polr1aO35134 Gm12419-201ENSMUST00000116649 636 ntBASIC18.93■□□□□ 0.62
Polr1aO35134 Gm11949-201ENSMUST00000117640 372 ntBASIC18.93■□□□□ 0.62
Polr1aO35134 Gm11675-201ENSMUST00000121873 832 ntBASIC18.93■□□□□ 0.62
Polr1aO35134 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC18.93■□□□□ 0.62
Polr1aO35134 Mir6998-201ENSMUST00000183343 64 ntBASIC18.93■□□□□ 0.62
Polr1aO35134 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Polr1aO35134 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC18.93■□□□□ 0.62
Polr1aO35134 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Polr1aO35134 AC098716.1-201ENSMUST00000213527 703 ntBASIC18.93■□□□□ 0.62
Polr1aO35134 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC18.93■□□□□ 0.62
Polr1aO35134 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Polr1aO35134 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Polr1aO35134 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 98.3 ms