Protein–RNA interactions for Protein: F6U473

Gm28305, Predicted gene 28305 (Fragment), mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28305F6U473 Smad9-201ENSMUST00000029371 5368 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Gm28305F6U473 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Gm28305F6U473 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Gm28305F6U473 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Gm28305F6U473 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
Gm28305F6U473 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Gm28305F6U473 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Gm28305F6U473 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Gm28305F6U473 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Gm28305F6U473 Erbb3-201ENSMUST00000082059 6016 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Gm28305F6U473 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Gm28305F6U473 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC9.13□□□□□ -0.95
Gm28305F6U473 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC9.13□□□□□ -0.95
Gm28305F6U473 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC9.13□□□□□ -0.95
Gm28305F6U473 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Gm28305F6U473 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
Gm28305F6U473 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC9.13□□□□□ -0.95
Gm28305F6U473 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC9.13□□□□□ -0.95
Gm28305F6U473 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Gm28305F6U473 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Gm28305F6U473 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Gm28305F6U473 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC9.13□□□□□ -0.95
Gm28305F6U473 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
Gm28305F6U473 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC9.13□□□□□ -0.95
Gm28305F6U473 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Gm28305F6U473 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Gm28305F6U473 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Gm28305F6U473 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Gm28305F6U473 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Gm28305F6U473 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Gm28305F6U473 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC9.13□□□□□ -0.95
Gm28305F6U473 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Gm28305F6U473 Abca3-203ENSMUST00000117337 5202 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Gm28305F6U473 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
Gm28305F6U473 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Gm28305F6U473 Thsd4-201ENSMUST00000034829 4816 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Gm28305F6U473 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Gm28305F6U473 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Gm28305F6U473 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC9.13□□□□□ -0.95
Gm28305F6U473 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Gm28305F6U473 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Gm28305F6U473 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Gm28305F6U473 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
Gm28305F6U473 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Gm28305F6U473 Card14-202ENSMUST00000106250 4206 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Gm28305F6U473 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Gm28305F6U473 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Gm28305F6U473 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Gm28305F6U473 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Gm28305F6U473 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Gm28305F6U473 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Gm28305F6U473 5430419D17Rik-203ENSMUST00000208921 7948 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Gm28305F6U473 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Gm28305F6U473 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC9.12□□□□□ -0.95
Gm28305F6U473 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Gm28305F6U473 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Gm28305F6U473 Gm28719-201ENSMUST00000187779 1757 ntBASIC9.12□□□□□ -0.95
Gm28305F6U473 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Gm28305F6U473 Gmps-201ENSMUST00000029405 8105 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Gm28305F6U473 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Gm28305F6U473 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
Gm28305F6U473 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Gm28305F6U473 Gm45776-201ENSMUST00000212366 1522 ntBASIC9.12□□□□□ -0.95
Gm28305F6U473 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC9.12□□□□□ -0.95
Gm28305F6U473 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Gm28305F6U473 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Gm28305F6U473 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Gm28305F6U473 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Gm28305F6U473 Ltbp1-203ENSMUST00000112516 5140 ntAPPRIS P3 TSL 5 BASIC9.12□□□□□ -0.95
Gm28305F6U473 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Gm28305F6U473 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Gm28305F6U473 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC9.12□□□□□ -0.95
Gm28305F6U473 Gm6184-201ENSMUST00000120403 1261 ntBASIC9.12□□□□□ -0.95
Gm28305F6U473 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC9.12□□□□□ -0.95
Gm28305F6U473 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Gm28305F6U473 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Gm28305F6U473 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC9.12□□□□□ -0.95
Gm28305F6U473 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC9.12□□□□□ -0.95
Gm28305F6U473 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Gm28305F6U473 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Gm28305F6U473 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Gm28305F6U473 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Gm28305F6U473 Spen-202ENSMUST00000105786 12299 ntAPPRIS P3 TSL 5 BASIC9.12□□□□□ -0.95
Gm28305F6U473 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Gm28305F6U473 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Gm28305F6U473 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Gm28305F6U473 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Gm28305F6U473 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Gm28305F6U473 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Gm28305F6U473 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Gm28305F6U473 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC9.12□□□□□ -0.95
Gm28305F6U473 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Gm28305F6U473 Txlng-201ENSMUST00000041370 3862 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
Gm28305F6U473 Fam53c-202ENSMUST00000097622 4256 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Gm28305F6U473 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC9.12□□□□□ -0.95
Gm28305F6U473 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Gm28305F6U473 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC9.12□□□□□ -0.95
Gm28305F6U473 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Gm28305F6U473 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Gm28305F6U473 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC9.12□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms