Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ube4aE9Q735 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Ube4aE9Q735 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ube4aE9Q735 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC15.04■□□□□ -0
Ube4aE9Q735 Gm44291-201ENSMUST00000203102 2865 ntBASIC15.04■□□□□ -0
Ube4aE9Q735 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ube4aE9Q735 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Ube4aE9Q735 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ube4aE9Q735 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ube4aE9Q735 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Ube4aE9Q735 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ube4aE9Q735 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Ube4aE9Q735 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC15.04■□□□□ -0
Ube4aE9Q735 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ube4aE9Q735 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ube4aE9Q735 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Ube4aE9Q735 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
Ube4aE9Q735 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ube4aE9Q735 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Ube4aE9Q735 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ube4aE9Q735 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Ube4aE9Q735 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC15.03■□□□□ -0
Ube4aE9Q735 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ube4aE9Q735 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC15.03■□□□□ -0
Ube4aE9Q735 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC15.03■□□□□ -0
Ube4aE9Q735 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Ube4aE9Q735 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC15.03■□□□□ -0
Ube4aE9Q735 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ube4aE9Q735 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC15.03■□□□□ -0
Ube4aE9Q735 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ube4aE9Q735 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC15.03■□□□□ -0
Ube4aE9Q735 Gm270-201ENSMUST00000223010 976 ntBASIC15.03■□□□□ -0
Ube4aE9Q735 Gm5455-201ENSMUST00000058710 715 ntBASIC15.03■□□□□ -0
Ube4aE9Q735 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Ube4aE9Q735 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Ube4aE9Q735 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ube4aE9Q735 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Ube4aE9Q735 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ube4aE9Q735 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Ube4aE9Q735 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Ube4aE9Q735 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC15.02■□□□□ -0
Ube4aE9Q735 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ube4aE9Q735 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ube4aE9Q735 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC15.02■□□□□ -0
Ube4aE9Q735 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC15.02■□□□□ -0
Ube4aE9Q735 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ube4aE9Q735 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ube4aE9Q735 Gm38346-201ENSMUST00000192379 2639 ntBASIC15.02■□□□□ -0
Ube4aE9Q735 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC15.02■□□□□ -0
Ube4aE9Q735 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ube4aE9Q735 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Ube4aE9Q735 Gm15515-201ENSMUST00000117827 822 ntBASIC15.02■□□□□ -0
Ube4aE9Q735 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC15.02■□□□□ -0
Ube4aE9Q735 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ube4aE9Q735 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ube4aE9Q735 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC15.02■□□□□ -0
Ube4aE9Q735 Spcs1-203ENSMUST00000226374 592 ntBASIC15.02■□□□□ -0
Ube4aE9Q735 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Ube4aE9Q735 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ube4aE9Q735 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ube4aE9Q735 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ube4aE9Q735 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ube4aE9Q735 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ube4aE9Q735 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Ube4aE9Q735 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ube4aE9Q735 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ube4aE9Q735 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Ube4aE9Q735 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ube4aE9Q735 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ube4aE9Q735 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ube4aE9Q735 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ube4aE9Q735 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ube4aE9Q735 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ube4aE9Q735 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
Ube4aE9Q735 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ube4aE9Q735 Gm9062-201ENSMUST00000117712 727 ntBASIC15.01□□□□□ -0.01
Ube4aE9Q735 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC15.01□□□□□ -0.01
Ube4aE9Q735 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC15.01□□□□□ -0.01
Ube4aE9Q735 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC15.01□□□□□ -0.01
Ube4aE9Q735 Gm23699-201ENSMUST00000158835 135 ntBASIC15.01□□□□□ -0.01
Ube4aE9Q735 Gm5523-201ENSMUST00000180415 997 ntBASIC15.01□□□□□ -0.01
Ube4aE9Q735 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC15.01□□□□□ -0.01
Ube4aE9Q735 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC15.01□□□□□ -0.01
Ube4aE9Q735 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC15.01□□□□□ -0.01
Ube4aE9Q735 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC15.01□□□□□ -0.01
Ube4aE9Q735 Gm17827-201ENSMUST00000211825 742 ntBASIC15.01□□□□□ -0.01
Ube4aE9Q735 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC15.01□□□□□ -0.01
Ube4aE9Q735 Olfr1347-205ENSMUST00000220413 964 ntBASIC15.01□□□□□ -0.01
Ube4aE9Q735 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ube4aE9Q735 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Ube4aE9Q735 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ube4aE9Q735 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ube4aE9Q735 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Ube4aE9Q735 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ube4aE9Q735 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ube4aE9Q735 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ube4aE9Q735 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ube4aE9Q735 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ube4aE9Q735 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Ube4aE9Q735 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms