Protein–RNA interactions for Protein: E9PX29

Sptbn4, Spectrin beta chain, mousemouse

Predictions only

Length 2,561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn4E9PX29 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Sptbn4E9PX29 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sptbn4E9PX29 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sptbn4E9PX29 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sptbn4E9PX29 Gm6831-202ENSMUST00000213025 1673 ntBASIC11.22□□□□□ -0.61
Sptbn4E9PX29 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Sptbn4E9PX29 Gm11663-201ENSMUST00000117888 290 ntBASIC11.22□□□□□ -0.61
Sptbn4E9PX29 Gm14993-201ENSMUST00000121180 164 ntBASIC11.22□□□□□ -0.61
Sptbn4E9PX29 Gm14717-201ENSMUST00000140450 649 ntTSL 3 BASIC11.22□□□□□ -0.61
Sptbn4E9PX29 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sptbn4E9PX29 Gm38228-201ENSMUST00000193169 1293 ntBASIC11.22□□□□□ -0.61
Sptbn4E9PX29 Gm2345-201ENSMUST00000193451 589 ntBASIC11.22□□□□□ -0.61
Sptbn4E9PX29 Gm44270-201ENSMUST00000203084 1234 ntBASIC11.22□□□□□ -0.61
Sptbn4E9PX29 Gm44421-201ENSMUST00000205064 1221 ntBASIC11.22□□□□□ -0.61
Sptbn4E9PX29 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Sptbn4E9PX29 CT009536.2-201ENSMUST00000225370 665 ntBASIC11.22□□□□□ -0.61
Sptbn4E9PX29 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sptbn4E9PX29 Prok2-201ENSMUST00000008273 594 ntTSL 3 BASIC11.22□□□□□ -0.61
Sptbn4E9PX29 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sptbn4E9PX29 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sptbn4E9PX29 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Sptbn4E9PX29 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC11.21□□□□□ -0.61
Sptbn4E9PX29 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sptbn4E9PX29 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sptbn4E9PX29 Gm37728-201ENSMUST00000195025 2292 ntBASIC11.21□□□□□ -0.61
Sptbn4E9PX29 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Sptbn4E9PX29 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sptbn4E9PX29 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sptbn4E9PX29 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Sptbn4E9PX29 Gm11619-201ENSMUST00000117474 237 ntBASIC11.21□□□□□ -0.61
Sptbn4E9PX29 Gm11500-201ENSMUST00000118237 601 ntBASIC11.21□□□□□ -0.61
Sptbn4E9PX29 Hoxd3os1-203ENSMUST00000145799 511 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Sptbn4E9PX29 Gm17214-201ENSMUST00000164501 541 ntBASIC11.21□□□□□ -0.61
Sptbn4E9PX29 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.21□□□□□ -0.61
Sptbn4E9PX29 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
Sptbn4E9PX29 Gm45592-201ENSMUST00000209605 1043 ntBASIC11.21□□□□□ -0.61
Sptbn4E9PX29 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sptbn4E9PX29 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Sptbn4E9PX29 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Sptbn4E9PX29 Uqcrc2-201ENSMUST00000033176 1896 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Sptbn4E9PX29 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Sptbn4E9PX29 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Sptbn4E9PX29 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC11.21□□□□□ -0.62
Sptbn4E9PX29 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Sptbn4E9PX29 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Sptbn4E9PX29 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Sptbn4E9PX29 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Sptbn4E9PX29 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Sptbn4E9PX29 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC11.21□□□□□ -0.62
Sptbn4E9PX29 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Sptbn4E9PX29 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Sptbn4E9PX29 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Sptbn4E9PX29 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Sptbn4E9PX29 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Sptbn4E9PX29 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Sptbn4E9PX29 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Sptbn4E9PX29 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Sptbn4E9PX29 Gm14232-201ENSMUST00000137176 446 ntTSL 3 BASIC11.21□□□□□ -0.62
Sptbn4E9PX29 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC11.21□□□□□ -0.62
Sptbn4E9PX29 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Sptbn4E9PX29 Gm34379-201ENSMUST00000195036 290 ntBASIC11.21□□□□□ -0.62
Sptbn4E9PX29 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC11.21□□□□□ -0.62
Sptbn4E9PX29 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC11.21□□□□□ -0.62
Sptbn4E9PX29 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC11.21□□□□□ -0.62
Sptbn4E9PX29 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Sptbn4E9PX29 CT030652.1-201ENSMUST00000227377 1235 ntBASIC11.21□□□□□ -0.62
Sptbn4E9PX29 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Sptbn4E9PX29 Tnfrsf9-202ENSMUST00000060901 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Sptbn4E9PX29 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC11.21□□□□□ -0.62
Sptbn4E9PX29 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Sptbn4E9PX29 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sptbn4E9PX29 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Sptbn4E9PX29 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sptbn4E9PX29 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sptbn4E9PX29 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sptbn4E9PX29 Gm38344-201ENSMUST00000195306 1353 ntBASIC11.2□□□□□ -0.62
Sptbn4E9PX29 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Sptbn4E9PX29 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sptbn4E9PX29 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sptbn4E9PX29 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sptbn4E9PX29 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sptbn4E9PX29 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sptbn4E9PX29 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sptbn4E9PX29 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sptbn4E9PX29 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sptbn4E9PX29 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Sptbn4E9PX29 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sptbn4E9PX29 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Sptbn4E9PX29 Gm26286-201ENSMUST00000104166 134 ntBASIC11.2□□□□□ -0.62
Sptbn4E9PX29 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sptbn4E9PX29 Gm9135-201ENSMUST00000182963 990 ntBASIC11.2□□□□□ -0.62
Sptbn4E9PX29 Gm29304-201ENSMUST00000186555 695 ntBASIC11.2□□□□□ -0.62
Sptbn4E9PX29 Gm29223-201ENSMUST00000188867 695 ntBASIC11.2□□□□□ -0.62
Sptbn4E9PX29 Gm37921-201ENSMUST00000194333 695 ntBASIC11.2□□□□□ -0.62
Sptbn4E9PX29 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC11.2□□□□□ -0.62
Sptbn4E9PX29 AC154361.2-201ENSMUST00000224747 943 ntBASIC11.2□□□□□ -0.62
Sptbn4E9PX29 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC11.2□□□□□ -0.62
Sptbn4E9PX29 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sptbn4E9PX29 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sptbn4E9PX29 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms