Protein–RNA interactions for Protein: D3Z3K2

Ccnb1ip1, E3 ubiquitin-protein ligase CCNB1IP1, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccnb1ip1D3Z3K2 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ccnb1ip1D3Z3K2 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccnb1ip1D3Z3K2 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccnb1ip1D3Z3K2 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccnb1ip1D3Z3K2 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccnb1ip1D3Z3K2 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccnb1ip1D3Z3K2 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccnb1ip1D3Z3K2 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccnb1ip1D3Z3K2 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccnb1ip1D3Z3K2 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Ccnb1ip1D3Z3K2 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC11.31□□□□□ -0.6
Ccnb1ip1D3Z3K2 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccnb1ip1D3Z3K2 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccnb1ip1D3Z3K2 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC11.31□□□□□ -0.6
Ccnb1ip1D3Z3K2 Nrn1-204ENSMUST00000224323 1779 ntBASIC11.31□□□□□ -0.6
Ccnb1ip1D3Z3K2 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccnb1ip1D3Z3K2 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccnb1ip1D3Z3K2 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccnb1ip1D3Z3K2 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccnb1ip1D3Z3K2 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Ccnb1ip1D3Z3K2 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ccnb1ip1D3Z3K2 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccnb1ip1D3Z3K2 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccnb1ip1D3Z3K2 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccnb1ip1D3Z3K2 Gm7642-201ENSMUST00000216345 1809 ntBASIC11.31□□□□□ -0.6
Ccnb1ip1D3Z3K2 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ccnb1ip1D3Z3K2 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccnb1ip1D3Z3K2 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ccnb1ip1D3Z3K2 Gm24589-201ENSMUST00000116692 94 ntBASIC11.31□□□□□ -0.6
Ccnb1ip1D3Z3K2 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ccnb1ip1D3Z3K2 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC11.31□□□□□ -0.6
Ccnb1ip1D3Z3K2 Rprl2-201ENSMUST00000157150 290 ntBASIC11.31□□□□□ -0.6
Ccnb1ip1D3Z3K2 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC11.31□□□□□ -0.6
Ccnb1ip1D3Z3K2 Gm38297-201ENSMUST00000195122 1057 ntBASIC11.31□□□□□ -0.6
Ccnb1ip1D3Z3K2 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ccnb1ip1D3Z3K2 Gm18916-201ENSMUST00000198264 1246 ntBASIC11.31□□□□□ -0.6
Ccnb1ip1D3Z3K2 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC11.31□□□□□ -0.6
Ccnb1ip1D3Z3K2 Gm45612-201ENSMUST00000211320 160 ntBASIC11.31□□□□□ -0.6
Ccnb1ip1D3Z3K2 Gm5628-201ENSMUST00000222318 1049 ntBASIC11.31□□□□□ -0.6
Ccnb1ip1D3Z3K2 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC11.31□□□□□ -0.6
Ccnb1ip1D3Z3K2 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccnb1ip1D3Z3K2 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccnb1ip1D3Z3K2 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccnb1ip1D3Z3K2 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccnb1ip1D3Z3K2 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccnb1ip1D3Z3K2 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Ccnb1ip1D3Z3K2 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccnb1ip1D3Z3K2 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Ccnb1ip1D3Z3K2 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC11.31□□□□□ -0.6
Ccnb1ip1D3Z3K2 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ccnb1ip1D3Z3K2 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ccnb1ip1D3Z3K2 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccnb1ip1D3Z3K2 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccnb1ip1D3Z3K2 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ccnb1ip1D3Z3K2 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccnb1ip1D3Z3K2 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ccnb1ip1D3Z3K2 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccnb1ip1D3Z3K2 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ccnb1ip1D3Z3K2 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccnb1ip1D3Z3K2 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC11.31□□□□□ -0.6
Ccnb1ip1D3Z3K2 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccnb1ip1D3Z3K2 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccnb1ip1D3Z3K2 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Ccnb1ip1D3Z3K2 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccnb1ip1D3Z3K2 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Ccnb1ip1D3Z3K2 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccnb1ip1D3Z3K2 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccnb1ip1D3Z3K2 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccnb1ip1D3Z3K2 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccnb1ip1D3Z3K2 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ccnb1ip1D3Z3K2 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccnb1ip1D3Z3K2 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ccnb1ip1D3Z3K2 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccnb1ip1D3Z3K2 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccnb1ip1D3Z3K2 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccnb1ip1D3Z3K2 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccnb1ip1D3Z3K2 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccnb1ip1D3Z3K2 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ccnb1ip1D3Z3K2 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC11.3□□□□□ -0.6
Ccnb1ip1D3Z3K2 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC11.3□□□□□ -0.6
Ccnb1ip1D3Z3K2 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC11.3□□□□□ -0.6
Ccnb1ip1D3Z3K2 Gm6447-201ENSMUST00000118905 835 ntBASIC11.3□□□□□ -0.6
Ccnb1ip1D3Z3K2 Gm12350-201ENSMUST00000121208 462 ntBASIC11.3□□□□□ -0.6
Ccnb1ip1D3Z3K2 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC11.3□□□□□ -0.6
Ccnb1ip1D3Z3K2 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC11.3□□□□□ -0.6
Ccnb1ip1D3Z3K2 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ccnb1ip1D3Z3K2 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC11.3□□□□□ -0.6
Ccnb1ip1D3Z3K2 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC11.3□□□□□ -0.6
Ccnb1ip1D3Z3K2 AC174742.1-201ENSMUST00000218272 304 ntBASIC11.3□□□□□ -0.6
Ccnb1ip1D3Z3K2 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC11.3□□□□□ -0.6
Ccnb1ip1D3Z3K2 Gm10371-202ENSMUST00000228010 1081 ntBASIC11.3□□□□□ -0.6
Ccnb1ip1D3Z3K2 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccnb1ip1D3Z3K2 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccnb1ip1D3Z3K2 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccnb1ip1D3Z3K2 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccnb1ip1D3Z3K2 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ccnb1ip1D3Z3K2 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccnb1ip1D3Z3K2 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccnb1ip1D3Z3K2 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC11.3□□□□□ -0.6
Ccnb1ip1D3Z3K2 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 71.1 ms