Protein–RNA interactions for Protein: B2RQC2

Usp42, Ubiquitin carboxyl-terminal hydrolase 42, mousemouse

Known RBP Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp42B2RQC2 Gm11661-201ENSMUST00000121761 1327 ntBASIC14.67□□□□□ -0.06
Usp42B2RQC2 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Usp42B2RQC2 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Usp42B2RQC2 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Usp42B2RQC2 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Usp42B2RQC2 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Usp42B2RQC2 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Usp42B2RQC2 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Usp42B2RQC2 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Usp42B2RQC2 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Usp42B2RQC2 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
Usp42B2RQC2 Gm12241-201ENSMUST00000118330 726 ntBASIC14.66□□□□□ -0.06
Usp42B2RQC2 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Usp42B2RQC2 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Usp42B2RQC2 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Usp42B2RQC2 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Usp42B2RQC2 Gm6334-201ENSMUST00000207083 228 ntBASIC14.66□□□□□ -0.06
Usp42B2RQC2 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC14.66□□□□□ -0.06
Usp42B2RQC2 Gm9368-201ENSMUST00000219348 831 ntBASIC14.66□□□□□ -0.06
Usp42B2RQC2 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Usp42B2RQC2 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Usp42B2RQC2 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Usp42B2RQC2 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Usp42B2RQC2 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Usp42B2RQC2 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Usp42B2RQC2 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Usp42B2RQC2 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Usp42B2RQC2 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Usp42B2RQC2 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Usp42B2RQC2 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Usp42B2RQC2 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Usp42B2RQC2 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Usp42B2RQC2 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Usp42B2RQC2 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Usp42B2RQC2 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Usp42B2RQC2 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Usp42B2RQC2 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Usp42B2RQC2 Gm18222-201ENSMUST00000202416 1387 ntBASIC14.66□□□□□ -0.06
Usp42B2RQC2 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Usp42B2RQC2 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC14.66□□□□□ -0.06
Usp42B2RQC2 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Usp42B2RQC2 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Usp42B2RQC2 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Usp42B2RQC2 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
Usp42B2RQC2 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Usp42B2RQC2 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Usp42B2RQC2 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Usp42B2RQC2 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Usp42B2RQC2 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Usp42B2RQC2 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Usp42B2RQC2 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Usp42B2RQC2 Gm8038-201ENSMUST00000164674 2044 ntBASIC14.66□□□□□ -0.06
Usp42B2RQC2 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC14.66□□□□□ -0.06
Usp42B2RQC2 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Usp42B2RQC2 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Usp42B2RQC2 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Usp42B2RQC2 Gm24845-201ENSMUST00000158034 109 ntBASIC14.66□□□□□ -0.06
Usp42B2RQC2 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC14.66□□□□□ -0.06
Usp42B2RQC2 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC14.66□□□□□ -0.06
Usp42B2RQC2 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC14.66□□□□□ -0.06
Usp42B2RQC2 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
Usp42B2RQC2 Cts7-204ENSMUST00000225321 1257 ntBASIC14.66□□□□□ -0.06
Usp42B2RQC2 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Usp42B2RQC2 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Usp42B2RQC2 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Usp42B2RQC2 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Usp42B2RQC2 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Usp42B2RQC2 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Usp42B2RQC2 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Usp42B2RQC2 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Usp42B2RQC2 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Usp42B2RQC2 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Usp42B2RQC2 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Usp42B2RQC2 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Usp42B2RQC2 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Usp42B2RQC2 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Usp42B2RQC2 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Usp42B2RQC2 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Usp42B2RQC2 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Usp42B2RQC2 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Usp42B2RQC2 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC14.65□□□□□ -0.06
Usp42B2RQC2 Gm15198-201ENSMUST00000117283 177 ntBASIC14.65□□□□□ -0.06
Usp42B2RQC2 Mir1938-201ENSMUST00000158746 100 ntBASIC14.65□□□□□ -0.06
Usp42B2RQC2 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Usp42B2RQC2 Gm2991-201ENSMUST00000173338 480 ntBASIC14.65□□□□□ -0.06
Usp42B2RQC2 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC14.65□□□□□ -0.06
Usp42B2RQC2 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC14.65□□□□□ -0.06
Usp42B2RQC2 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC14.65□□□□□ -0.06
Usp42B2RQC2 Gm44958-201ENSMUST00000203734 736 ntBASIC14.65□□□□□ -0.06
Usp42B2RQC2 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Usp42B2RQC2 Gm45331-201ENSMUST00000209868 554 ntBASIC14.65□□□□□ -0.06
Usp42B2RQC2 AC098716.1-201ENSMUST00000213527 703 ntBASIC14.65□□□□□ -0.06
Usp42B2RQC2 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Usp42B2RQC2 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Usp42B2RQC2 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC14.65□□□□□ -0.06
Usp42B2RQC2 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Usp42B2RQC2 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC14.64□□□□□ -0.07
Usp42B2RQC2 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC14.64□□□□□ -0.07
Usp42B2RQC2 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Usp42B2RQC2 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms