Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Chd6A3KFM7 Gm45592-201ENSMUST00000209605 1043 ntBASIC10.09□□□□□ -0.79
Chd6A3KFM7 Mrpl23-207ENSMUST00000210803 590 ntTSL 3 BASIC10.09□□□□□ -0.79
Chd6A3KFM7 Gm9204-201ENSMUST00000212641 947 ntBASIC10.09□□□□□ -0.79
Chd6A3KFM7 AC153954.1-201ENSMUST00000216959 255 ntBASIC10.09□□□□□ -0.79
Chd6A3KFM7 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC10.09□□□□□ -0.79
Chd6A3KFM7 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Chd6A3KFM7 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Chd6A3KFM7 Gpr19-201ENSMUST00000046255 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Chd6A3KFM7 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Chd6A3KFM7 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Chd6A3KFM7 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Chd6A3KFM7 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC10.09□□□□□ -0.79
Chd6A3KFM7 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Chd6A3KFM7 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Chd6A3KFM7 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Chd6A3KFM7 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Chd6A3KFM7 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Chd6A3KFM7 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Chd6A3KFM7 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Chd6A3KFM7 Gm8968-201ENSMUST00000199133 1303 ntBASIC10.09□□□□□ -0.79
Chd6A3KFM7 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Chd6A3KFM7 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Chd6A3KFM7 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC10.09□□□□□ -0.79
Chd6A3KFM7 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Chd6A3KFM7 Plac8-203ENSMUST00000112910 1224 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
Chd6A3KFM7 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC10.09□□□□□ -0.79
Chd6A3KFM7 Gm3726-201ENSMUST00000203110 785 ntBASIC10.09□□□□□ -0.79
Chd6A3KFM7 Gm8342-201ENSMUST00000209839 757 ntBASIC10.09□□□□□ -0.79
Chd6A3KFM7 Olfr1347-205ENSMUST00000220413 964 ntBASIC10.09□□□□□ -0.79
Chd6A3KFM7 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Chd6A3KFM7 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Chd6A3KFM7 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC10.09□□□□□ -0.79
Chd6A3KFM7 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Chd6A3KFM7 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Chd6A3KFM7 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Chd6A3KFM7 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Chd6A3KFM7 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Chd6A3KFM7 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Chd6A3KFM7 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Chd6A3KFM7 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Chd6A3KFM7 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Chd6A3KFM7 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Chd6A3KFM7 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Chd6A3KFM7 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Chd6A3KFM7 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Chd6A3KFM7 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Chd6A3KFM7 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Chd6A3KFM7 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Chd6A3KFM7 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Chd6A3KFM7 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Chd6A3KFM7 Gm11663-201ENSMUST00000117888 290 ntBASIC10.08□□□□□ -0.8
Chd6A3KFM7 Gm34379-201ENSMUST00000195036 290 ntBASIC10.08□□□□□ -0.8
Chd6A3KFM7 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC10.08□□□□□ -0.8
Chd6A3KFM7 Lsm8-204ENSMUST00000201141 503 ntTSL 3 BASIC10.08□□□□□ -0.8
Chd6A3KFM7 Tsga10ip-201ENSMUST00000044527 487 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Chd6A3KFM7 Cd300c2-201ENSMUST00000092464 1187 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Chd6A3KFM7 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Chd6A3KFM7 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Chd6A3KFM7 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Chd6A3KFM7 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Chd6A3KFM7 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Chd6A3KFM7 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Chd6A3KFM7 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Chd6A3KFM7 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Chd6A3KFM7 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Chd6A3KFM7 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Chd6A3KFM7 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Chd6A3KFM7 Gm23769-201ENSMUST00000104441 121 ntBASIC10.08□□□□□ -0.8
Chd6A3KFM7 Dppa3-ps-201ENSMUST00000116499 451 ntBASIC10.08□□□□□ -0.8
Chd6A3KFM7 Gm6548-201ENSMUST00000167498 1165 ntBASIC10.08□□□□□ -0.8
Chd6A3KFM7 Gm27956-201ENSMUST00000175604 260 ntBASIC10.08□□□□□ -0.8
Chd6A3KFM7 Gm26134-201ENSMUST00000178484 110 ntBASIC10.08□□□□□ -0.8
Chd6A3KFM7 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Chd6A3KFM7 Gm45812-201ENSMUST00000212199 192 ntTSL 5 BASIC10.08□□□□□ -0.8
Chd6A3KFM7 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC10.08□□□□□ -0.8
Chd6A3KFM7 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC10.08□□□□□ -0.8
Chd6A3KFM7 Hpf1-201ENSMUST00000037190 1191 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Chd6A3KFM7 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Chd6A3KFM7 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Chd6A3KFM7 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Chd6A3KFM7 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Chd6A3KFM7 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Chd6A3KFM7 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Chd6A3KFM7 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Chd6A3KFM7 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Chd6A3KFM7 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC10.08□□□□□ -0.8
Chd6A3KFM7 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC10.08□□□□□ -0.8
Chd6A3KFM7 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Chd6A3KFM7 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Chd6A3KFM7 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Chd6A3KFM7 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC10.07□□□□□ -0.8
Chd6A3KFM7 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC10.07□□□□□ -0.8
Chd6A3KFM7 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC10.07□□□□□ -0.8
Chd6A3KFM7 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Chd6A3KFM7 Gm13981-201ENSMUST00000122360 447 ntBASIC10.07□□□□□ -0.8
Chd6A3KFM7 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC10.07□□□□□ -0.8
Chd6A3KFM7 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Chd6A3KFM7 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC10.07□□□□□ -0.8
Chd6A3KFM7 Lockd-205ENSMUST00000185152 496 ntTSL 5 BASIC10.07□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms