Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scn1aA2APX8 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scn1aA2APX8 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scn1aA2APX8 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Scn1aA2APX8 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scn1aA2APX8 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Scn1aA2APX8 Gm13296-201ENSMUST00000117854 997 ntBASIC13.1□□□□□ -0.31
Scn1aA2APX8 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC13.1□□□□□ -0.31
Scn1aA2APX8 Gm9678-201ENSMUST00000198979 1149 ntBASIC13.1□□□□□ -0.31
Scn1aA2APX8 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC13.1□□□□□ -0.31
Scn1aA2APX8 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Scn1aA2APX8 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC13.1□□□□□ -0.31
Scn1aA2APX8 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC13.1□□□□□ -0.31
Scn1aA2APX8 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scn1aA2APX8 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC13.1□□□□□ -0.31
Scn1aA2APX8 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scn1aA2APX8 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn1aA2APX8 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Scn1aA2APX8 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn1aA2APX8 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn1aA2APX8 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Scn1aA2APX8 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Scn1aA2APX8 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn1aA2APX8 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn1aA2APX8 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Scn1aA2APX8 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn1aA2APX8 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn1aA2APX8 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn1aA2APX8 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
Scn1aA2APX8 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Scn1aA2APX8 Mir6927-201ENSMUST00000184494 71 ntBASIC13.09□□□□□ -0.31
Scn1aA2APX8 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Scn1aA2APX8 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Scn1aA2APX8 AC093022.1-201ENSMUST00000226949 1072 ntBASIC13.09□□□□□ -0.31
Scn1aA2APX8 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn1aA2APX8 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn1aA2APX8 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn1aA2APX8 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn1aA2APX8 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn1aA2APX8 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn1aA2APX8 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn1aA2APX8 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn1aA2APX8 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Scn1aA2APX8 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn1aA2APX8 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn1aA2APX8 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn1aA2APX8 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn1aA2APX8 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC13.09□□□□□ -0.31
Scn1aA2APX8 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn1aA2APX8 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Scn1aA2APX8 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn1aA2APX8 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn1aA2APX8 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn1aA2APX8 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Scn1aA2APX8 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC13.08□□□□□ -0.31
Scn1aA2APX8 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Scn1aA2APX8 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Scn1aA2APX8 Gm23200-201ENSMUST00000104379 132 ntBASIC13.08□□□□□ -0.31
Scn1aA2APX8 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Scn1aA2APX8 Gm24990-201ENSMUST00000157406 323 ntBASIC13.08□□□□□ -0.31
Scn1aA2APX8 Gm44651-201ENSMUST00000207343 372 ntBASIC13.08□□□□□ -0.31
Scn1aA2APX8 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Scn1aA2APX8 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Scn1aA2APX8 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Scn1aA2APX8 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC13.08□□□□□ -0.31
Scn1aA2APX8 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC13.08□□□□□ -0.31
Scn1aA2APX8 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scn1aA2APX8 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scn1aA2APX8 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scn1aA2APX8 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scn1aA2APX8 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scn1aA2APX8 Gm5846-201ENSMUST00000193146 1414 ntBASIC13.08□□□□□ -0.32
Scn1aA2APX8 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scn1aA2APX8 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Scn1aA2APX8 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Scn1aA2APX8 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Scn1aA2APX8 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scn1aA2APX8 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Scn1aA2APX8 Gm5419-201ENSMUST00000119301 527 ntBASIC13.08□□□□□ -0.32
Scn1aA2APX8 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scn1aA2APX8 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
Scn1aA2APX8 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC13.08□□□□□ -0.32
Scn1aA2APX8 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scn1aA2APX8 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Scn1aA2APX8 Mir433-201ENSMUST00000093564 124 ntBASIC13.08□□□□□ -0.32
Scn1aA2APX8 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scn1aA2APX8 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scn1aA2APX8 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Scn1aA2APX8 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scn1aA2APX8 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Scn1aA2APX8 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scn1aA2APX8 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scn1aA2APX8 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scn1aA2APX8 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scn1aA2APX8 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Scn1aA2APX8 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scn1aA2APX8 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scn1aA2APX8 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Scn1aA2APX8 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC13.07□□□□□ -0.32
Scn1aA2APX8 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms