Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Ptprm-203ENSMUST00000224091 3773 ntBASIC9.13□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC9.13□□□□□ -0.95
Trav9n-2A0A0G2JDP3 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC9.13□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC9.13□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC9.13□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Gm12390-201ENSMUST00000117897 397 ntBASIC9.13□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Gm1335-201ENSMUST00000121653 386 ntBASIC9.13□□□□□ -0.95
Trav9n-2A0A0G2JDP3 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC9.13□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Gm6652-201ENSMUST00000186414 1070 ntBASIC9.13□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC9.13□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Gm40466-201ENSMUST00000212174 422 ntBASIC9.13□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC9.13□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC9.13□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Gm17435-202ENSMUST00000212699 1998 ntBASIC9.13□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC9.13□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC9.13□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC9.13□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav9n-2A0A0G2JDP3 AC125108.1-201ENSMUST00000218986 2330 ntBASIC9.13□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC9.12□□□□□ -0.95
Trav9n-2A0A0G2JDP3 AC159195.1-201ENSMUST00000225867 2086 ntBASIC9.12□□□□□ -0.95
Trav9n-2A0A0G2JDP3 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC9.12□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC9.12□□□□□ -0.95
Trav9n-2A0A0G2JDP3 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC9.12□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav9n-2A0A0G2JDP3 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Gm27196-201ENSMUST00000184787 2582 ntBASIC9.12□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Snord83b-201ENSMUST00000104546 94 ntBASIC9.12□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC9.12□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Gm16177-201ENSMUST00000120728 718 ntBASIC9.12□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC9.12□□□□□ -0.95
Trav9n-2A0A0G2JDP3 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Gm5745-201ENSMUST00000183748 313 ntBASIC9.12□□□□□ -0.95
Trav9n-2A0A0G2JDP3 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC9.12□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC9.12□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Gm43818-201ENSMUST00000200605 466 ntBASIC9.12□□□□□ -0.95
Trav9n-2A0A0G2JDP3 AC165260.3-202ENSMUST00000224550 1031 ntBASIC9.12□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC9.12□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav9n-2A0A0G2JDP3 AC117194.1-201ENSMUST00000224847 3002 ntBASIC9.12□□□□□ -0.95
Trav9n-2A0A0G2JDP3 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms