Protein–RNA interactions for Protein: Q9WUH2

Lhx9, LIM/homeobox protein Lhx9, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx9Q9WUH2 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Lhx9Q9WUH2 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lhx9Q9WUH2 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lhx9Q9WUH2 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lhx9Q9WUH2 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Lhx9Q9WUH2 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.49
Lhx9Q9WUH2 Gm27196-201ENSMUST00000184787 2582 ntBASIC11.96□□□□□ -0.49
Lhx9Q9WUH2 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Lhx9Q9WUH2 Gm7789-202ENSMUST00000211273 1400 ntBASIC11.96□□□□□ -0.49
Lhx9Q9WUH2 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Lhx9Q9WUH2 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lhx9Q9WUH2 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lhx9Q9WUH2 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lhx9Q9WUH2 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lhx9Q9WUH2 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC11.96□□□□□ -0.49
Lhx9Q9WUH2 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lhx9Q9WUH2 Gm43823-201ENSMUST00000197391 1808 ntBASIC11.96□□□□□ -0.49
Lhx9Q9WUH2 Gm23270-201ENSMUST00000104055 131 ntBASIC11.96□□□□□ -0.49
Lhx9Q9WUH2 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lhx9Q9WUH2 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lhx9Q9WUH2 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC11.96□□□□□ -0.49
Lhx9Q9WUH2 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC11.96□□□□□ -0.49
Lhx9Q9WUH2 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Lhx9Q9WUH2 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC11.96□□□□□ -0.49
Lhx9Q9WUH2 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC11.96□□□□□ -0.49
Lhx9Q9WUH2 Gm5363-201ENSMUST00000211927 938 ntBASIC11.96□□□□□ -0.49
Lhx9Q9WUH2 Gm18615-201ENSMUST00000222919 1031 ntBASIC11.96□□□□□ -0.49
Lhx9Q9WUH2 CT030182.1-201ENSMUST00000225935 533 ntBASIC11.96□□□□□ -0.49
Lhx9Q9WUH2 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lhx9Q9WUH2 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lhx9Q9WUH2 Gm22058-201ENSMUST00000083393 310 ntBASIC11.96□□□□□ -0.49
Lhx9Q9WUH2 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lhx9Q9WUH2 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Lhx9Q9WUH2 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Lhx9Q9WUH2 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC11.96□□□□□ -0.5
Lhx9Q9WUH2 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Lhx9Q9WUH2 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.5
Lhx9Q9WUH2 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
Lhx9Q9WUH2 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Lhx9Q9WUH2 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Lhx9Q9WUH2 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Lhx9Q9WUH2 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Lhx9Q9WUH2 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Lhx9Q9WUH2 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Lhx9Q9WUH2 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.5
Lhx9Q9WUH2 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Lhx9Q9WUH2 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lhx9Q9WUH2 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lhx9Q9WUH2 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lhx9Q9WUH2 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lhx9Q9WUH2 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lhx9Q9WUH2 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Lhx9Q9WUH2 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Lhx9Q9WUH2 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Lhx9Q9WUH2 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Lhx9Q9WUH2 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC11.95□□□□□ -0.5
Lhx9Q9WUH2 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Lhx9Q9WUH2 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC11.95□□□□□ -0.5
Lhx9Q9WUH2 Gm13097-201ENSMUST00000210722 397 ntBASIC11.95□□□□□ -0.5
Lhx9Q9WUH2 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
Lhx9Q9WUH2 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Lhx9Q9WUH2 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Lhx9Q9WUH2 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lhx9Q9WUH2 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Lhx9Q9WUH2 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lhx9Q9WUH2 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lhx9Q9WUH2 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lhx9Q9WUH2 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Lhx9Q9WUH2 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Lhx9Q9WUH2 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Lhx9Q9WUH2 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lhx9Q9WUH2 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lhx9Q9WUH2 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC11.94□□□□□ -0.5
Lhx9Q9WUH2 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lhx9Q9WUH2 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lhx9Q9WUH2 Gm3287-205ENSMUST00000228893 1332 ntBASIC11.94□□□□□ -0.5
Lhx9Q9WUH2 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lhx9Q9WUH2 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lhx9Q9WUH2 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lhx9Q9WUH2 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Lhx9Q9WUH2 Gm25214-201ENSMUST00000104573 129 ntBASIC11.94□□□□□ -0.5
Lhx9Q9WUH2 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lhx9Q9WUH2 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lhx9Q9WUH2 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lhx9Q9WUH2 Gm12012-201ENSMUST00000118857 1066 ntBASIC11.94□□□□□ -0.5
Lhx9Q9WUH2 Gm5863-201ENSMUST00000121760 1008 ntBASIC11.94□□□□□ -0.5
Lhx9Q9WUH2 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Lhx9Q9WUH2 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC11.94□□□□□ -0.5
Lhx9Q9WUH2 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC11.94□□□□□ -0.5
Lhx9Q9WUH2 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lhx9Q9WUH2 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Lhx9Q9WUH2 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lhx9Q9WUH2 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC11.94□□□□□ -0.5
Lhx9Q9WUH2 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lhx9Q9WUH2 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Lhx9Q9WUH2 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC11.94□□□□□ -0.5
Lhx9Q9WUH2 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC11.94□□□□□ -0.5
Lhx9Q9WUH2 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC11.94□□□□□ -0.5
Lhx9Q9WUH2 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lhx9Q9WUH2 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 73.9 ms