Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Scn8aQ9WTU3 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scn8aQ9WTU3 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Scn8aQ9WTU3 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Scn8aQ9WTU3 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC12.58□□□□□ -0.4
Scn8aQ9WTU3 Gm24990-201ENSMUST00000157406 323 ntBASIC12.58□□□□□ -0.4
Scn8aQ9WTU3 Gm18734-201ENSMUST00000172937 808 ntBASIC12.58□□□□□ -0.4
Scn8aQ9WTU3 Gm17931-201ENSMUST00000208132 634 ntBASIC12.58□□□□□ -0.4
Scn8aQ9WTU3 Gm5363-201ENSMUST00000211927 938 ntBASIC12.58□□□□□ -0.4
Scn8aQ9WTU3 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scn8aQ9WTU3 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scn8aQ9WTU3 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scn8aQ9WTU3 Gm5846-201ENSMUST00000193146 1414 ntBASIC12.58□□□□□ -0.4
Scn8aQ9WTU3 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scn8aQ9WTU3 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scn8aQ9WTU3 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
Scn8aQ9WTU3 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.58□□□□□ -0.4
Scn8aQ9WTU3 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scn8aQ9WTU3 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scn8aQ9WTU3 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.58□□□□□ -0.4
Scn8aQ9WTU3 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scn8aQ9WTU3 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scn8aQ9WTU3 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scn8aQ9WTU3 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Scn8aQ9WTU3 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC12.58□□□□□ -0.4
Scn8aQ9WTU3 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.58□□□□□ -0.4
Scn8aQ9WTU3 Gm4034-201ENSMUST00000187674 480 ntBASIC12.58□□□□□ -0.4
Scn8aQ9WTU3 Gm44124-201ENSMUST00000204159 472 ntBASIC12.58□□□□□ -0.4
Scn8aQ9WTU3 Rps4l-202ENSMUST00000204242 789 ntBASIC12.58□□□□□ -0.4
Scn8aQ9WTU3 Gm44651-201ENSMUST00000207343 372 ntBASIC12.58□□□□□ -0.4
Scn8aQ9WTU3 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC12.58□□□□□ -0.4
Scn8aQ9WTU3 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scn8aQ9WTU3 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scn8aQ9WTU3 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Scn8aQ9WTU3 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scn8aQ9WTU3 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scn8aQ9WTU3 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scn8aQ9WTU3 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Scn8aQ9WTU3 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scn8aQ9WTU3 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.57□□□□□ -0.4
Scn8aQ9WTU3 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.57□□□□□ -0.4
Scn8aQ9WTU3 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scn8aQ9WTU3 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scn8aQ9WTU3 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Scn8aQ9WTU3 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Scn8aQ9WTU3 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.57□□□□□ -0.4
Scn8aQ9WTU3 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Scn8aQ9WTU3 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Scn8aQ9WTU3 Gm9678-201ENSMUST00000198979 1149 ntBASIC12.57□□□□□ -0.4
Scn8aQ9WTU3 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Scn8aQ9WTU3 Gm17827-201ENSMUST00000211825 742 ntBASIC12.57□□□□□ -0.4
Scn8aQ9WTU3 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scn8aQ9WTU3 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scn8aQ9WTU3 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scn8aQ9WTU3 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scn8aQ9WTU3 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Scn8aQ9WTU3 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Scn8aQ9WTU3 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Scn8aQ9WTU3 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Scn8aQ9WTU3 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scn8aQ9WTU3 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.57□□□□□ -0.4
Scn8aQ9WTU3 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Scn8aQ9WTU3 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
Scn8aQ9WTU3 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scn8aQ9WTU3 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC12.57□□□□□ -0.4
Scn8aQ9WTU3 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn8aQ9WTU3 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn8aQ9WTU3 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn8aQ9WTU3 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Scn8aQ9WTU3 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC12.56□□□□□ -0.4
Scn8aQ9WTU3 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC12.56□□□□□ -0.4
Scn8aQ9WTU3 Gm12217-201ENSMUST00000118858 696 ntBASIC12.56□□□□□ -0.4
Scn8aQ9WTU3 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC12.56□□□□□ -0.4
Scn8aQ9WTU3 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC12.56□□□□□ -0.4
Scn8aQ9WTU3 Gm5616-201ENSMUST00000165252 384 ntBASIC12.56□□□□□ -0.4
Scn8aQ9WTU3 Gm8741-201ENSMUST00000174736 384 ntBASIC12.56□□□□□ -0.4
Scn8aQ9WTU3 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC12.56□□□□□ -0.4
Scn8aQ9WTU3 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn8aQ9WTU3 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC12.56□□□□□ -0.4
Scn8aQ9WTU3 Mettl6-204ENSMUST00000227595 1027 ntBASIC12.56□□□□□ -0.4
Scn8aQ9WTU3 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn8aQ9WTU3 Gm5455-201ENSMUST00000058710 715 ntBASIC12.56□□□□□ -0.4
Scn8aQ9WTU3 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn8aQ9WTU3 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Scn8aQ9WTU3 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC12.56□□□□□ -0.4
Scn8aQ9WTU3 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Scn8aQ9WTU3 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn8aQ9WTU3 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn8aQ9WTU3 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn8aQ9WTU3 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn8aQ9WTU3 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Scn8aQ9WTU3 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn8aQ9WTU3 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn8aQ9WTU3 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn8aQ9WTU3 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn8aQ9WTU3 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn8aQ9WTU3 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn8aQ9WTU3 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Scn8aQ9WTU3 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn8aQ9WTU3 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms