Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Scn11aQ9R053 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scn11aQ9R053 Gm43184-201ENSMUST00000197247 542 ntBASIC14.67□□□□□ -0.06
Scn11aQ9R053 Gm4482-201ENSMUST00000200876 742 ntBASIC14.67□□□□□ -0.06
Scn11aQ9R053 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scn11aQ9R053 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scn11aQ9R053 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scn11aQ9R053 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC14.67□□□□□ -0.06
Scn11aQ9R053 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scn11aQ9R053 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Scn11aQ9R053 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Scn11aQ9R053 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Scn11aQ9R053 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scn11aQ9R053 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scn11aQ9R053 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Scn11aQ9R053 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Scn11aQ9R053 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Scn11aQ9R053 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Scn11aQ9R053 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC14.66□□□□□ -0.06
Scn11aQ9R053 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
Scn11aQ9R053 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Scn11aQ9R053 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC14.66□□□□□ -0.06
Scn11aQ9R053 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Scn11aQ9R053 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
Scn11aQ9R053 Gm10731-201ENSMUST00000181171 448 ntBASIC14.66□□□□□ -0.06
Scn11aQ9R053 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Scn11aQ9R053 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Scn11aQ9R053 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC14.66□□□□□ -0.06
Scn11aQ9R053 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Scn11aQ9R053 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Scn11aQ9R053 Gm7114-201ENSMUST00000190159 1789 ntBASIC14.66□□□□□ -0.06
Scn11aQ9R053 Gm37437-201ENSMUST00000194451 1937 ntBASIC14.66□□□□□ -0.06
Scn11aQ9R053 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Scn11aQ9R053 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Scn11aQ9R053 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Scn11aQ9R053 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Scn11aQ9R053 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Scn11aQ9R053 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Scn11aQ9R053 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Scn11aQ9R053 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC14.65□□□□□ -0.06
Scn11aQ9R053 Gm7541-201ENSMUST00000118361 535 ntBASIC14.65□□□□□ -0.06
Scn11aQ9R053 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC14.65□□□□□ -0.06
Scn11aQ9R053 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Scn11aQ9R053 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Scn11aQ9R053 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Scn11aQ9R053 Gm9358-201ENSMUST00000183067 927 ntBASIC14.65□□□□□ -0.06
Scn11aQ9R053 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC14.65□□□□□ -0.06
Scn11aQ9R053 Gm38385-201ENSMUST00000194454 2351 ntBASIC14.65□□□□□ -0.06
Scn11aQ9R053 Gm43677-201ENSMUST00000198098 2378 ntBASIC14.65□□□□□ -0.06
Scn11aQ9R053 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Scn11aQ9R053 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Scn11aQ9R053 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Scn11aQ9R053 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Scn11aQ9R053 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Scn11aQ9R053 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Scn11aQ9R053 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Scn11aQ9R053 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC14.65□□□□□ -0.06
Scn11aQ9R053 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC14.65□□□□□ -0.06
Scn11aQ9R053 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Scn11aQ9R053 Gm5780-201ENSMUST00000217774 1834 ntBASIC14.65□□□□□ -0.06
Scn11aQ9R053 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
Scn11aQ9R053 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Scn11aQ9R053 Gm5847-201ENSMUST00000178959 1595 ntBASIC14.65□□□□□ -0.06
Scn11aQ9R053 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Scn11aQ9R053 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Scn11aQ9R053 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Scn11aQ9R053 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.65□□□□□ -0.06
Scn11aQ9R053 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC14.65□□□□□ -0.06
Scn11aQ9R053 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC14.65□□□□□ -0.06
Scn11aQ9R053 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Scn11aQ9R053 Gm23218-201ENSMUST00000158124 276 ntBASIC14.65□□□□□ -0.06
Scn11aQ9R053 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Scn11aQ9R053 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Scn11aQ9R053 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC14.65□□□□□ -0.06
Scn11aQ9R053 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Scn11aQ9R053 Gm34023-201ENSMUST00000195539 217 ntBASIC14.65□□□□□ -0.06
Scn11aQ9R053 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC14.65□□□□□ -0.06
Scn11aQ9R053 AC098716.1-201ENSMUST00000213527 703 ntBASIC14.65□□□□□ -0.06
Scn11aQ9R053 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC14.65□□□□□ -0.06
Scn11aQ9R053 Gm1821-202ENSMUST00000227415 750 ntBASIC14.65□□□□□ -0.06
Scn11aQ9R053 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Scn11aQ9R053 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Scn11aQ9R053 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
Scn11aQ9R053 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.07
Scn11aQ9R053 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Scn11aQ9R053 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Scn11aQ9R053 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC14.64□□□□□ -0.07
Scn11aQ9R053 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Scn11aQ9R053 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Scn11aQ9R053 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Scn11aQ9R053 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Scn11aQ9R053 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Scn11aQ9R053 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Scn11aQ9R053 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Scn11aQ9R053 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Scn11aQ9R053 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Scn11aQ9R053 Gm12857-201ENSMUST00000117678 592 ntBASIC14.64□□□□□ -0.07
Scn11aQ9R053 Gm23085-201ENSMUST00000157849 293 ntBASIC14.64□□□□□ -0.07
Scn11aQ9R053 Gm38117-201ENSMUST00000194653 939 ntBASIC14.64□□□□□ -0.07
Scn11aQ9R053 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms