Protein–RNA interactions for Protein: Q9R049

Amfr, E3 ubiquitin-protein ligase AMFR, mousemouse

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AmfrQ9R049 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
AmfrQ9R049 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
AmfrQ9R049 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
AmfrQ9R049 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
AmfrQ9R049 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
AmfrQ9R049 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
AmfrQ9R049 CT009757.3-201ENSMUST00000223367 2320 ntBASIC14.08□□□□□ -0.16
AmfrQ9R049 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
AmfrQ9R049 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
AmfrQ9R049 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
AmfrQ9R049 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC14.08□□□□□ -0.16
AmfrQ9R049 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
AmfrQ9R049 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
AmfrQ9R049 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
AmfrQ9R049 Snord83b-201ENSMUST00000104546 94 ntBASIC14.08□□□□□ -0.16
AmfrQ9R049 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC14.08□□□□□ -0.16
AmfrQ9R049 Gm12363-201ENSMUST00000122250 668 ntBASIC14.08□□□□□ -0.16
AmfrQ9R049 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC14.08□□□□□ -0.16
AmfrQ9R049 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
AmfrQ9R049 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
AmfrQ9R049 Gm17420-201ENSMUST00000164753 153 ntBASIC14.08□□□□□ -0.16
AmfrQ9R049 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
AmfrQ9R049 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
AmfrQ9R049 Gm44772-201ENSMUST00000207623 1191 ntBASIC14.08□□□□□ -0.16
AmfrQ9R049 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
AmfrQ9R049 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC14.08□□□□□ -0.16
AmfrQ9R049 Gm4935-201ENSMUST00000221316 1198 ntBASIC14.08□□□□□ -0.16
AmfrQ9R049 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC14.08□□□□□ -0.16
AmfrQ9R049 Gm19163-201ENSMUST00000223313 780 ntBASIC14.08□□□□□ -0.16
AmfrQ9R049 AC022775.2-201ENSMUST00000227885 646 ntBASIC14.08□□□□□ -0.16
AmfrQ9R049 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
AmfrQ9R049 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
AmfrQ9R049 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
AmfrQ9R049 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
AmfrQ9R049 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
AmfrQ9R049 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
AmfrQ9R049 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
AmfrQ9R049 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
AmfrQ9R049 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC14.08□□□□□ -0.16
AmfrQ9R049 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
AmfrQ9R049 Gm37269-201ENSMUST00000193906 1891 ntBASIC14.08□□□□□ -0.16
AmfrQ9R049 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC14.08□□□□□ -0.16
AmfrQ9R049 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
AmfrQ9R049 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
AmfrQ9R049 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
AmfrQ9R049 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
AmfrQ9R049 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
AmfrQ9R049 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
AmfrQ9R049 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
AmfrQ9R049 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
AmfrQ9R049 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
AmfrQ9R049 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
AmfrQ9R049 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC14.07□□□□□ -0.16
AmfrQ9R049 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
AmfrQ9R049 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
AmfrQ9R049 Gm11591-201ENSMUST00000120063 702 ntBASIC14.07□□□□□ -0.16
AmfrQ9R049 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC14.07□□□□□ -0.16
AmfrQ9R049 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC14.07□□□□□ -0.16
AmfrQ9R049 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
AmfrQ9R049 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
AmfrQ9R049 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
AmfrQ9R049 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
AmfrQ9R049 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
AmfrQ9R049 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC14.07□□□□□ -0.16
AmfrQ9R049 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
AmfrQ9R049 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
AmfrQ9R049 Gm43579-201ENSMUST00000202387 1307 ntBASIC14.07□□□□□ -0.16
AmfrQ9R049 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
AmfrQ9R049 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC14.07□□□□□ -0.16
AmfrQ9R049 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
AmfrQ9R049 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
AmfrQ9R049 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
AmfrQ9R049 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
AmfrQ9R049 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
AmfrQ9R049 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
AmfrQ9R049 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
AmfrQ9R049 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
AmfrQ9R049 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
AmfrQ9R049 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC14.06□□□□□ -0.16
AmfrQ9R049 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC14.06□□□□□ -0.16
AmfrQ9R049 Mir1938-201ENSMUST00000158746 100 ntBASIC14.06□□□□□ -0.16
AmfrQ9R049 Gm6222-202ENSMUST00000182143 629 ntBASIC14.06□□□□□ -0.16
AmfrQ9R049 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC14.06□□□□□ -0.16
AmfrQ9R049 Gm18916-201ENSMUST00000198264 1246 ntBASIC14.06□□□□□ -0.16
AmfrQ9R049 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC14.06□□□□□ -0.16
AmfrQ9R049 Ighv8-10-201ENSMUST00000199579 358 ntBASIC14.06□□□□□ -0.16
AmfrQ9R049 AC133598.1-201ENSMUST00000224327 660 ntBASIC14.06□□□□□ -0.16
AmfrQ9R049 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
AmfrQ9R049 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
AmfrQ9R049 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
AmfrQ9R049 Gm8399-201ENSMUST00000082300 1117 ntBASIC14.06□□□□□ -0.16
AmfrQ9R049 n-R5s195-201ENSMUST00000082891 119 ntBASIC14.06□□□□□ -0.16
AmfrQ9R049 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
AmfrQ9R049 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
AmfrQ9R049 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
AmfrQ9R049 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC14.06□□□□□ -0.16
AmfrQ9R049 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
AmfrQ9R049 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC14.06□□□□□ -0.16
AmfrQ9R049 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
AmfrQ9R049 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms