Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Gm43463-201ENSMUST00000195967 1803 ntBASIC11.44□□□□□ -0.58
Clcf1Q9QZM3 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clcf1Q9QZM3 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Clcf1Q9QZM3 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC11.44□□□□□ -0.58
Clcf1Q9QZM3 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clcf1Q9QZM3 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Clcf1Q9QZM3 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clcf1Q9QZM3 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clcf1Q9QZM3 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Clcf1Q9QZM3 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC11.44□□□□□ -0.58
Clcf1Q9QZM3 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clcf1Q9QZM3 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clcf1Q9QZM3 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clcf1Q9QZM3 Gm5989-201ENSMUST00000096092 2077 ntBASIC11.44□□□□□ -0.58
Clcf1Q9QZM3 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clcf1Q9QZM3 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Clcf1Q9QZM3 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clcf1Q9QZM3 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clcf1Q9QZM3 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clcf1Q9QZM3 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clcf1Q9QZM3 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC11.44□□□□□ -0.58
Clcf1Q9QZM3 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC11.44□□□□□ -0.58
Clcf1Q9QZM3 Gm44772-201ENSMUST00000207623 1191 ntBASIC11.44□□□□□ -0.58
Clcf1Q9QZM3 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC11.44□□□□□ -0.58
Clcf1Q9QZM3 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC11.44□□□□□ -0.58
Clcf1Q9QZM3 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Clcf1Q9QZM3 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Clcf1Q9QZM3 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clcf1Q9QZM3 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC11.44□□□□□ -0.58
Clcf1Q9QZM3 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clcf1Q9QZM3 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Clcf1Q9QZM3 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Clcf1Q9QZM3 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clcf1Q9QZM3 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clcf1Q9QZM3 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Clcf1Q9QZM3 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clcf1Q9QZM3 Gm45643-201ENSMUST00000211364 1484 ntBASIC11.44□□□□□ -0.58
Clcf1Q9QZM3 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clcf1Q9QZM3 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clcf1Q9QZM3 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Clcf1Q9QZM3 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clcf1Q9QZM3 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Clcf1Q9QZM3 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Clcf1Q9QZM3 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clcf1Q9QZM3 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
Clcf1Q9QZM3 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Clcf1Q9QZM3 Gm38157-201ENSMUST00000194178 1698 ntBASIC11.43□□□□□ -0.58
Clcf1Q9QZM3 CT009713.10-201ENSMUST00000225013 1986 ntBASIC11.43□□□□□ -0.58
Clcf1Q9QZM3 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clcf1Q9QZM3 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clcf1Q9QZM3 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clcf1Q9QZM3 Gm15459-201ENSMUST00000117405 1941 ntBASIC11.43□□□□□ -0.58
Clcf1Q9QZM3 Gm8355-201ENSMUST00000177767 1941 ntBASIC11.43□□□□□ -0.58
Clcf1Q9QZM3 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clcf1Q9QZM3 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC11.43□□□□□ -0.58
Clcf1Q9QZM3 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clcf1Q9QZM3 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clcf1Q9QZM3 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clcf1Q9QZM3 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clcf1Q9QZM3 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC11.43□□□□□ -0.58
Clcf1Q9QZM3 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC11.43□□□□□ -0.58
Clcf1Q9QZM3 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC11.43□□□□□ -0.58
Clcf1Q9QZM3 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC11.43□□□□□ -0.58
Clcf1Q9QZM3 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC11.43□□□□□ -0.58
Clcf1Q9QZM3 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clcf1Q9QZM3 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Clcf1Q9QZM3 Gm43822-201ENSMUST00000200285 476 ntBASIC11.43□□□□□ -0.58
Clcf1Q9QZM3 Gm8099-201ENSMUST00000200510 742 ntBASIC11.43□□□□□ -0.58
Clcf1Q9QZM3 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC11.43□□□□□ -0.58
Clcf1Q9QZM3 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC11.43□□□□□ -0.58
Clcf1Q9QZM3 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC11.43□□□□□ -0.58
Clcf1Q9QZM3 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC11.43□□□□□ -0.58
Clcf1Q9QZM3 Gm9368-201ENSMUST00000219348 831 ntBASIC11.43□□□□□ -0.58
Clcf1Q9QZM3 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clcf1Q9QZM3 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Clcf1Q9QZM3 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Clcf1Q9QZM3 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clcf1Q9QZM3 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clcf1Q9QZM3 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clcf1Q9QZM3 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Clcf1Q9QZM3 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clcf1Q9QZM3 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Clcf1Q9QZM3 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clcf1Q9QZM3 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clcf1Q9QZM3 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clcf1Q9QZM3 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Clcf1Q9QZM3 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clcf1Q9QZM3 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Clcf1Q9QZM3 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clcf1Q9QZM3 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clcf1Q9QZM3 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC11.42□□□□□ -0.58
Clcf1Q9QZM3 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clcf1Q9QZM3 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Clcf1Q9QZM3 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clcf1Q9QZM3 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC11.42□□□□□ -0.58
Clcf1Q9QZM3 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clcf1Q9QZM3 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clcf1Q9QZM3 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC11.42□□□□□ -0.58
Clcf1Q9QZM3 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Clcf1Q9QZM3 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms