Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm6152-201ENSMUST00000151704 340 ntBASIC12.42□□□□□ -0.42
Lima1Q9ERG0 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Lima1Q9ERG0 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.42□□□□□ -0.42
Lima1Q9ERG0 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.42□□□□□ -0.42
Lima1Q9ERG0 Gm19184-201ENSMUST00000196798 928 ntBASIC12.42□□□□□ -0.42
Lima1Q9ERG0 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC12.42□□□□□ -0.42
Lima1Q9ERG0 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Lima1Q9ERG0 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lima1Q9ERG0 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lima1Q9ERG0 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lima1Q9ERG0 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lima1Q9ERG0 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lima1Q9ERG0 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lima1Q9ERG0 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lima1Q9ERG0 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lima1Q9ERG0 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Lima1Q9ERG0 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Lima1Q9ERG0 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lima1Q9ERG0 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lima1Q9ERG0 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lima1Q9ERG0 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lima1Q9ERG0 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lima1Q9ERG0 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lima1Q9ERG0 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Lima1Q9ERG0 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lima1Q9ERG0 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.42□□□□□ -0.42
Lima1Q9ERG0 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lima1Q9ERG0 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lima1Q9ERG0 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC12.42□□□□□ -0.42
Lima1Q9ERG0 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lima1Q9ERG0 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Lima1Q9ERG0 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lima1Q9ERG0 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lima1Q9ERG0 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lima1Q9ERG0 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Lima1Q9ERG0 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lima1Q9ERG0 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lima1Q9ERG0 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lima1Q9ERG0 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lima1Q9ERG0 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lima1Q9ERG0 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lima1Q9ERG0 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lima1Q9ERG0 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Lima1Q9ERG0 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lima1Q9ERG0 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lima1Q9ERG0 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lima1Q9ERG0 Gm14350-201ENSMUST00000116642 640 ntBASIC12.41□□□□□ -0.42
Lima1Q9ERG0 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.41□□□□□ -0.42
Lima1Q9ERG0 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC12.41□□□□□ -0.42
Lima1Q9ERG0 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lima1Q9ERG0 Gm27390-201ENSMUST00000184516 176 ntBASIC12.41□□□□□ -0.42
Lima1Q9ERG0 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Lima1Q9ERG0 Gm45384-201ENSMUST00000210451 277 ntBASIC12.41□□□□□ -0.42
Lima1Q9ERG0 Gm9908-201ENSMUST00000211534 448 ntBASIC12.41□□□□□ -0.42
Lima1Q9ERG0 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lima1Q9ERG0 AC150560.1-201ENSMUST00000227731 1187 ntBASIC12.41□□□□□ -0.42
Lima1Q9ERG0 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lima1Q9ERG0 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Lima1Q9ERG0 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Lima1Q9ERG0 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Lima1Q9ERG0 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lima1Q9ERG0 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Lima1Q9ERG0 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lima1Q9ERG0 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Lima1Q9ERG0 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lima1Q9ERG0 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lima1Q9ERG0 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lima1Q9ERG0 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lima1Q9ERG0 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Lima1Q9ERG0 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Lima1Q9ERG0 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lima1Q9ERG0 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Lima1Q9ERG0 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Lima1Q9ERG0 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lima1Q9ERG0 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Lima1Q9ERG0 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lima1Q9ERG0 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lima1Q9ERG0 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Lima1Q9ERG0 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lima1Q9ERG0 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Lima1Q9ERG0 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lima1Q9ERG0 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lima1Q9ERG0 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lima1Q9ERG0 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lima1Q9ERG0 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Lima1Q9ERG0 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Lima1Q9ERG0 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lima1Q9ERG0 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Lima1Q9ERG0 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
Lima1Q9ERG0 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.4□□□□□ -0.42
Lima1Q9ERG0 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lima1Q9ERG0 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lima1Q9ERG0 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lima1Q9ERG0 Mir686-201ENSMUST00000102174 109 ntBASIC12.4□□□□□ -0.42
Lima1Q9ERG0 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.4□□□□□ -0.42
Lima1Q9ERG0 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Lima1Q9ERG0 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Lima1Q9ERG0 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Lima1Q9ERG0 Gm9630-201ENSMUST00000178304 885 ntBASIC12.4□□□□□ -0.42
Lima1Q9ERG0 H2-Pa-201ENSMUST00000182803 626 ntBASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms