Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Tubb3Q9ERD7 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Tubb3Q9ERD7 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tubb3Q9ERD7 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.52□□□□□ -0.41
Tubb3Q9ERD7 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
Tubb3Q9ERD7 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC12.52□□□□□ -0.41
Tubb3Q9ERD7 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tubb3Q9ERD7 Gm26927-201ENSMUST00000182385 965 ntBASIC12.52□□□□□ -0.41
Tubb3Q9ERD7 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Tubb3Q9ERD7 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Tubb3Q9ERD7 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.52□□□□□ -0.41
Tubb3Q9ERD7 Gm38319-201ENSMUST00000194537 1266 ntBASIC12.52□□□□□ -0.41
Tubb3Q9ERD7 Gm19184-201ENSMUST00000196798 928 ntBASIC12.52□□□□□ -0.41
Tubb3Q9ERD7 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.52□□□□□ -0.41
Tubb3Q9ERD7 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC12.52□□□□□ -0.41
Tubb3Q9ERD7 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tubb3Q9ERD7 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tubb3Q9ERD7 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tubb3Q9ERD7 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Tubb3Q9ERD7 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Tubb3Q9ERD7 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tubb3Q9ERD7 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tubb3Q9ERD7 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tubb3Q9ERD7 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tubb3Q9ERD7 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Tubb3Q9ERD7 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Tubb3Q9ERD7 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tubb3Q9ERD7 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tubb3Q9ERD7 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.52□□□□□ -0.41
Tubb3Q9ERD7 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tubb3Q9ERD7 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tubb3Q9ERD7 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tubb3Q9ERD7 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Tubb3Q9ERD7 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tubb3Q9ERD7 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Tubb3Q9ERD7 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.51□□□□□ -0.41
Tubb3Q9ERD7 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tubb3Q9ERD7 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tubb3Q9ERD7 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Tubb3Q9ERD7 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tubb3Q9ERD7 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tubb3Q9ERD7 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tubb3Q9ERD7 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Tubb3Q9ERD7 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tubb3Q9ERD7 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tubb3Q9ERD7 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tubb3Q9ERD7 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tubb3Q9ERD7 Gm5940-201ENSMUST00000117582 1068 ntBASIC12.51□□□□□ -0.41
Tubb3Q9ERD7 Gm13813-201ENSMUST00000120998 787 ntBASIC12.51□□□□□ -0.41
Tubb3Q9ERD7 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Tubb3Q9ERD7 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Tubb3Q9ERD7 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.51□□□□□ -0.41
Tubb3Q9ERD7 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC12.51□□□□□ -0.41
Tubb3Q9ERD7 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Tubb3Q9ERD7 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Tubb3Q9ERD7 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Tubb3Q9ERD7 Gm37008-201ENSMUST00000195712 319 ntBASIC12.51□□□□□ -0.41
Tubb3Q9ERD7 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tubb3Q9ERD7 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tubb3Q9ERD7 Gm7399-201ENSMUST00000032395 858 ntBASIC12.51□□□□□ -0.41
Tubb3Q9ERD7 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tubb3Q9ERD7 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Tubb3Q9ERD7 Gm11661-201ENSMUST00000121761 1327 ntBASIC12.51□□□□□ -0.41
Tubb3Q9ERD7 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.51□□□□□ -0.41
Tubb3Q9ERD7 Gm18222-201ENSMUST00000202416 1387 ntBASIC12.51□□□□□ -0.41
Tubb3Q9ERD7 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tubb3Q9ERD7 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tubb3Q9ERD7 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Tubb3Q9ERD7 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Tubb3Q9ERD7 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tubb3Q9ERD7 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tubb3Q9ERD7 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tubb3Q9ERD7 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Tubb3Q9ERD7 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tubb3Q9ERD7 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
Tubb3Q9ERD7 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Tubb3Q9ERD7 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tubb3Q9ERD7 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Tubb3Q9ERD7 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.5□□□□□ -0.41
Tubb3Q9ERD7 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tubb3Q9ERD7 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tubb3Q9ERD7 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tubb3Q9ERD7 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tubb3Q9ERD7 Gm15198-201ENSMUST00000117283 177 ntBASIC12.5□□□□□ -0.41
Tubb3Q9ERD7 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC12.5□□□□□ -0.41
Tubb3Q9ERD7 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Tubb3Q9ERD7 Gm18054-201ENSMUST00000207539 555 ntBASIC12.5□□□□□ -0.41
Tubb3Q9ERD7 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.5□□□□□ -0.41
Tubb3Q9ERD7 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Tubb3Q9ERD7 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tubb3Q9ERD7 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tubb3Q9ERD7 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Tubb3Q9ERD7 Olfr582-201ENSMUST00000098212 960 ntBASIC12.5□□□□□ -0.41
Tubb3Q9ERD7 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tubb3Q9ERD7 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Tubb3Q9ERD7 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.5□□□□□ -0.41
Tubb3Q9ERD7 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tubb3Q9ERD7 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Tubb3Q9ERD7 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tubb3Q9ERD7 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms