Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
Hmgn3Q9DCB1 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hmgn3Q9DCB1 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hmgn3Q9DCB1 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hmgn3Q9DCB1 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Hmgn3Q9DCB1 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Hmgn3Q9DCB1 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC11.81□□□□□ -0.52
Hmgn3Q9DCB1 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC11.81□□□□□ -0.52
Hmgn3Q9DCB1 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC11.81□□□□□ -0.52
Hmgn3Q9DCB1 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Hmgn3Q9DCB1 Gm6888-201ENSMUST00000221983 706 ntBASIC11.81□□□□□ -0.52
Hmgn3Q9DCB1 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hmgn3Q9DCB1 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hmgn3Q9DCB1 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Hmgn3Q9DCB1 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Hmgn3Q9DCB1 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Hmgn3Q9DCB1 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hmgn3Q9DCB1 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Hmgn3Q9DCB1 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Hmgn3Q9DCB1 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Hmgn3Q9DCB1 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hmgn3Q9DCB1 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.81□□□□□ -0.52
Hmgn3Q9DCB1 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC11.81□□□□□ -0.52
Hmgn3Q9DCB1 Gm15991-202ENSMUST00000212123 3565 ntBASIC11.81□□□□□ -0.52
Hmgn3Q9DCB1 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hmgn3Q9DCB1 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hmgn3Q9DCB1 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC11.81□□□□□ -0.52
Hmgn3Q9DCB1 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hmgn3Q9DCB1 Gm36987-201ENSMUST00000194704 2979 ntBASIC11.81□□□□□ -0.52
Hmgn3Q9DCB1 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hmgn3Q9DCB1 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hmgn3Q9DCB1 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hmgn3Q9DCB1 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Hmgn3Q9DCB1 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hmgn3Q9DCB1 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hmgn3Q9DCB1 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Hmgn3Q9DCB1 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hmgn3Q9DCB1 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.81□□□□□ -0.52
Hmgn3Q9DCB1 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hmgn3Q9DCB1 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC11.81□□□□□ -0.52
Hmgn3Q9DCB1 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Hmgn3Q9DCB1 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hmgn3Q9DCB1 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hmgn3Q9DCB1 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC11.8□□□□□ -0.52
Hmgn3Q9DCB1 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hmgn3Q9DCB1 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Hmgn3Q9DCB1 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
Hmgn3Q9DCB1 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC11.8□□□□□ -0.52
Hmgn3Q9DCB1 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hmgn3Q9DCB1 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hmgn3Q9DCB1 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Hmgn3Q9DCB1 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hmgn3Q9DCB1 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hmgn3Q9DCB1 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
Hmgn3Q9DCB1 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hmgn3Q9DCB1 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hmgn3Q9DCB1 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Hmgn3Q9DCB1 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hmgn3Q9DCB1 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hmgn3Q9DCB1 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hmgn3Q9DCB1 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Hmgn3Q9DCB1 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hmgn3Q9DCB1 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hmgn3Q9DCB1 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hmgn3Q9DCB1 Gm12485-201ENSMUST00000119641 291 ntBASIC11.8□□□□□ -0.52
Hmgn3Q9DCB1 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC11.8□□□□□ -0.52
Hmgn3Q9DCB1 Gm29608-201ENSMUST00000190444 463 ntBASIC11.8□□□□□ -0.52
Hmgn3Q9DCB1 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Hmgn3Q9DCB1 Gm37171-201ENSMUST00000192636 1185 ntBASIC11.8□□□□□ -0.52
Hmgn3Q9DCB1 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC11.8□□□□□ -0.52
Hmgn3Q9DCB1 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hmgn3Q9DCB1 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hmgn3Q9DCB1 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hmgn3Q9DCB1 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Hmgn3Q9DCB1 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Hmgn3Q9DCB1 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hmgn3Q9DCB1 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Hmgn3Q9DCB1 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hmgn3Q9DCB1 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.8□□□□□ -0.52
Hmgn3Q9DCB1 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Hmgn3Q9DCB1 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hmgn3Q9DCB1 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC11.8□□□□□ -0.52
Hmgn3Q9DCB1 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC11.8□□□□□ -0.52
Hmgn3Q9DCB1 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hmgn3Q9DCB1 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hmgn3Q9DCB1 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hmgn3Q9DCB1 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hmgn3Q9DCB1 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hmgn3Q9DCB1 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Hmgn3Q9DCB1 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hmgn3Q9DCB1 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hmgn3Q9DCB1 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hmgn3Q9DCB1 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hmgn3Q9DCB1 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hmgn3Q9DCB1 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC11.79□□□□□ -0.52
Hmgn3Q9DCB1 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hmgn3Q9DCB1 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hmgn3Q9DCB1 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hmgn3Q9DCB1 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC11.79□□□□□ -0.52
Hmgn3Q9DCB1 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms